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Pgp phosphoglycolate phosphatase [ Chinchilla lanigera (long-tailed chinchilla) ]

Gene ID: 102011702, updated on 10-Mar-2024

Summary

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Gene symbol
Pgp
Gene description
phosphoglycolate phosphatase
See related
Ensembl:ENSCLAG00000016428
Gene type
protein coding
RefSeq status
MODEL
Organism
Chinchilla lanigera
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Chinchillidae; Chinchilla
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
101 current ChiLan1.0 (GCF_000276665.1) Unplaced Scaffold NW_004955442.1 (15051149..15053123)

NW_004955442.1Genomic Context describing neighboring genes Neighboring gene deoxyribonuclease 1 like 2 Neighboring gene E4F transcription factor 1 Neighboring gene BRICHOS domain containing 5 Neighboring gene MTOR associated protein, LST8 homolog Neighboring gene CASK interacting protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004955442.1 Unplaced Scaffold Reference ChiLan1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycerol-3-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphoglycolate phosphatase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chinchilla lanigera Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChiLan1.0 Primary Assembly

Genomic

  1. NW_004955442.1 Reference ChiLan1.0 Primary Assembly

    Range
    15051149..15053123
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013517733.1 → XP_013373187.1  phosphoglycolate phosphatase

    UniProtKB/TrEMBL
    A0A8C2W1T6
    Related
    ENSCLAP00000023937.1, ENSCLAT00000024165.1
    Conserved Domains (3) summary
    TIGR01452
    Location:26 → 313
    PGP_euk; phosphoglycolate/pyridoxal phosphate phosphatase family
    pfam13242
    Location:230 → 313
    Hydrolase_like; HAD-hyrolase-like
    pfam13344
    Location:29 → 136
    Hydrolase_6; Haloacid dehalogenase-like hydrolase
Nucleotide Protein
Heading Accession and Version

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