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Clptm1l CLPTM1 like [ Chinchilla lanigera (long-tailed chinchilla) ]

Gene ID: 102007920, updated on 10-Mar-2024

Summary

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Gene symbol
Clptm1l
Gene description
CLPTM1 like
See related
Ensembl:ENSCLAG00000006371
Gene type
protein coding
RefSeq status
MODEL
Organism
Chinchilla lanigera
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Chinchillidae; Chinchilla
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
101 current ChiLan1.0 (GCF_000276665.1) Unplaced Scaffold NW_004955504.1 (677824..695660, complement)

NW_004955504.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 6 member 18 Neighboring gene telomerase reverse transcriptase Neighboring gene uncharacterized LOC106146921 Neighboring gene solute carrier family 6 member 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004955504.1 Unplaced Scaffold Reference ChiLan1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cleft lip and palate transmembrane protein 1-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chinchilla lanigera Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChiLan1.0 Primary Assembly

Genomic

  1. NW_004955504.1 Reference ChiLan1.0 Primary Assembly

    Range
    677824..695660 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005407056.2 → XP_005407113.1  cleft lip and palate transmembrane protein 1-like protein isoform X2

    Conserved Domains (1) summary
    pfam05602
    Location:22 → 421
    CLPTM1; Cleft lip and palate transmembrane protein 1 (CLPTM1)

  2. XM_005407055.2 → XP_005407112.1  cleft lip and palate transmembrane protein 1-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8C2V851
    Related
    ENSCLAP00000009150.1, ENSCLAT00000009279.1
    Conserved Domains (1) summary
    pfam05602
    Location:22 → 422
    CLPTM1; Cleft lip and palate transmembrane protein 1 (CLPTM1)
Nucleotide Protein
Heading Accession and Version

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