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Rer1 retention in endoplasmic reticulum sorting receptor 1 [ Chinchilla lanigera (long-tailed chinchilla) ]

Gene ID: 102007903, updated on 10-Mar-2024

Summary

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Gene symbol
Rer1
Gene description
retention in endoplasmic reticulum sorting receptor 1
See related
Ensembl:ENSCLAG00000004419
Gene type
protein coding
RefSeq status
MODEL
Organism
Chinchilla lanigera
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Chinchillidae; Chinchilla
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
101 current ChiLan1.0 (GCF_000276665.1) Unplaced Scaffold NW_004955486.1 (8791457..8802691, complement)

NW_004955486.1Genomic Context describing neighboring genes Neighboring gene pantothenate kinase 4 (inactive) Neighboring gene phospholipase C eta 2 Neighboring gene peroxisomal biogenesis factor 10 Neighboring gene MORN repeat containing 1 Neighboring gene SKI proto-oncogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004955486.1 Unplaced Scaffold Reference ChiLan1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein retention in ER lumen IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein RER1
Names
RER1 retention in endoplasmic reticulum 1 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chinchilla lanigera Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChiLan1.0 Primary Assembly

Genomic

  1. NW_004955486.1 Reference ChiLan1.0 Primary Assembly

    Range
    8791457..8802691 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005404170.2 → XP_005404227.1  protein RER1 isoform X1

    Conserved Domains (1) summary
    pfam03248
    Location:63 → 227
    Rer1; Rer1 family

  2. XM_005404171.2 → XP_005404228.1  protein RER1 isoform X2

    See identical proteins and their annotated locations for XP_005404228.1

    UniProtKB/TrEMBL
    A0A8C2YKY1
    Related
    ENSCLAP00000006251.1, ENSCLAT00000006354.1
    Conserved Domains (1) summary
    pfam03248
    Location:20 → 185
    Rer1; Rer1 family
Nucleotide Protein
Heading Accession and Version

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