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Zxdc ZXD family zinc finger C [ Chinchilla lanigera (long-tailed chinchilla) ]

Gene ID: 102006923, updated on 10-Mar-2024

Summary

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Gene symbol
Zxdc
Gene description
ZXD family zinc finger C
See related
Ensembl:ENSCLAG00000007278
Gene type
protein coding
RefSeq status
MODEL
Organism
Chinchilla lanigera
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Chinchillidae; Chinchilla
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See Zxdc in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
101 current ChiLan1.0 (GCF_000276665.1) Unplaced Scaffold NW_004955421.1 (21686119..21724948, complement)

NW_004955421.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106148430 Neighboring gene cilia and flagella associated protein 100 Neighboring gene uncharacterized LOC102019922 Neighboring gene urocanate hydratase 1 Neighboring gene carbohydrate sulfotransferase 13

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004955421.1 Unplaced Scaffold Reference ChiLan1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein ZXDC

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chinchilla lanigera Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChiLan1.0 Primary Assembly

Genomic

  1. NW_004955421.1 Reference ChiLan1.0 Primary Assembly

    Range
    21686119..21724948 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005383928.2 → XP_005383985.2  zinc finger protein ZXDC

    Related
    ENSCLAP00000010544.1, ENSCLAT00000010675.1
    Conserved Domains (5) summary
    COG5048
    Location:476 → 751
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:439 → 458
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:314 → 338
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:331 → 357
    zf-H2C2_2; Zinc-finger double domain
    pfam17017
    Location:314 → 459
    zf-C2H2_aberr; Aberrant zinc-finger
Nucleotide Protein
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