U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Gabpb1 GA binding protein transcription factor subunit beta 1 [ Chinchilla lanigera (long-tailed chinchilla) ]

Gene ID: 102003625, updated on 10-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
Gabpb1
Gene description
GA binding protein transcription factor subunit beta 1
See related
Ensembl:ENSCLAG00000008550
Gene type
protein coding
RefSeq status
MODEL
Organism
Chinchilla lanigera
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Chinchillidae; Chinchilla
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current ChiLan1.0 (GCF_000276665.1) Unplaced Scaffold NW_004955409.1 (3983857..4036433)

NW_004955409.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102003417 Neighboring gene uncharacterized LOC106147721 Neighboring gene uncharacterized LOC106147722 Neighboring gene histidine decarboxylase Neighboring gene solute carrier family 27 member 2

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_004955409.1 Unplaced Scaffold Reference ChiLan1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription cis-regulatory region binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
GA-binding protein subunit beta-1
Names
GA binding protein transcription factor beta subunit 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Chinchilla lanigera Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChiLan1.0 Primary Assembly

Genomic

  1. NW_004955409.1 Reference ChiLan1.0 Primary Assembly

    Range
    3983857..4036433
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013510293.1 → XP_013365747.1  GA-binding protein subunit beta-1

    Related
    ENSCLAP00000012373.1, ENSCLAT00000012516.1
    Conserved Domains (4) summary
    sd00045
    Location:38 → 68
    ANK; ANK repeat [structural motif]
    pfam13637
    Location:10 → 58
    Ank_4; Ankyrin repeats (many copies)
    pfam12796
    Location:42 → 133
    Ank_2; Ankyrin repeats (3 copies)
    pfam16566
    Location:341 → 390
    CREPT; Cell-cycle alteration and expression-elevated protein in tumor
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.