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Lama2 laminin subunit alpha 2 [ Microtus ochrogaster (prairie vole) ]

Gene ID: 102001764, updated on 10-Mar-2024

Summary

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Gene symbol
Lama2
Gene description
laminin subunit alpha 2
See related
Ensembl:ENSMOCG00000017522
Gene type
protein coding
RefSeq status
MODEL
Organism
Microtus ochrogaster
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Microtus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: LG4
Exon count:
58
Annotation release Status Assembly LG Location
102 current MicOch1.0 (GCF_000317375.1) LG4 NC_022030.1 (155120..493081)

Linkage Group LG4 - NC_022030.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L35 pseudogene Neighboring gene laminin subunit alpha-2-like Neighboring gene U2 spliceosomal RNA Neighboring gene Rho GTPase activating protein 18 Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_022030.1 Chromosome LG4 Reference MicOch1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables signaling receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of embryonic development IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: laminin subunit alpha-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microtus ochrogaster Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MicOch1.0

Genomic

  1. NC_022030.1 Reference MicOch1.0

    Range
    155120..493081
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026786227.1 → XP_026642028.1  LOW QUALITY PROTEIN: laminin subunit alpha-2

    UniProtKB/TrEMBL
    A0A8J6GRA7
    Related
    ENSMOCP00000019621.1, ENSMOCT00000023434.1
    Conserved Domains (10) summary
    smart00180
    Location:598 → 642
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    smart00281
    Location:860 → 995
    LamB; Laminin B domain
    cd00055
    Location:548 → 596
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00110
    Location:2571 → 2723
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam00053
    Location:1051 → 1097
    Laminin_EGF; Laminin EGF domain
    pfam00054
    Location:2423 → 2543
    Laminin_G_1; Laminin G domain
    pfam06009
    Location:1668 → 1804
    Laminin_II; Laminin Domain II
    pfam00052
    Location:214 → 353
    Laminin_B; Laminin B (Domain IV)
    pfam06008
    Location:1225 → 1483
    Laminin_I; Laminin Domain I
    cl25732
    Location:1446 → 1776
    SMC_N; RecF/RecN/SMC N terminal domain
Nucleotide Protein
Heading Accession and Version

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