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Ybx1 Y-box binding protein 1 [ Microtus ochrogaster (prairie vole) ]

Gene ID: 101996416, updated on 8-Mar-2024

Summary

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Gene symbol
Ybx1
Gene description
Y-box binding protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Microtus ochrogaster
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Microtus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 10
Exon count:
6
Annotation release Status Assembly Chr Location
102 current MicOch1.0 (GCF_000317375.1) 10 NC_022016.1 (63713685..63729764)

Chromosome 10 - NC_022016.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 30 Neighboring gene peptidylprolyl isomerase H Neighboring gene claudin 19 Neighboring gene prolyl 3-hydroxylase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_022016.1 Chromosome 10 Reference MicOch1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of messenger ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclease-sensitive element-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microtus ochrogaster Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MicOch1.0

Genomic

  1. NC_022016.1 Reference MicOch1.0

    Range
    63713685..63729764
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013348325.1 → XP_013203779.1  nuclease-sensitive element-binding protein 1

    UniProtKB/TrEMBL
    A0A8J6KJZ9
    Conserved Domains (1) summary
    cd04458
    Location:15 → 44
    CSP_CDS; Cold-Shock Protein (CSP) contains an S1-like cold-shock domain (CSD) that is found in eukaryotes, prokaryotes, and archaea. CSP's include the major cold-shock proteins CspA and CspB in bacteria and the eukaryotic gene regulatory factor Y-box protein. ...
Nucleotide Protein
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