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Rfx3 regulatory factor X3 [ Microtus ochrogaster (prairie vole) ]

Gene ID: 101990517, updated on 8-Mar-2024

Summary

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Gene symbol
Rfx3
Gene description
regulatory factor X3
See related
Ensembl:ENSMOCG00000018931
Gene type
protein coding
RefSeq status
MODEL
Organism
Microtus ochrogaster
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Microtus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
18
Annotation release Status Assembly Chr Location
102 current MicOch1.0 (GCF_000317375.1) 8 NC_022015.1 (56936159..57192678, complement)

Chromosome 8 - NC_022015.1Genomic Context describing neighboring genes Neighboring gene heterogeneous nuclear ribonucleoprotein A3 pseudogene Neighboring gene pumilio RNA binding family member 3 Neighboring gene ADP/ATP translocase 2 pseudogene Neighboring gene GLIS family zinc finger 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_022015.1 Chromosome 8 Reference MicOch1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor RFX3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microtus ochrogaster Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MicOch1.0

Genomic

  1. NC_022015.1 Reference MicOch1.0

    Range
    56936159..57192678 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026781166.1 → XP_026636967.1  transcription factor RFX3 isoform X2

    UniProtKB/TrEMBL
    A0A8J6H370
    Conserved Domains (2) summary
    pfam02257
    Location:181 → 257
    RFX_DNA_binding; RFX DNA-binding domain
    pfam04589
    Location:77 → 159
    RFX1_trans_act; RFX1 transcription activation region

  2. XM_026781165.1 → XP_026636966.1  transcription factor RFX3 isoform X1

    UniProtKB/TrEMBL
    A0A8J6H370
    Conserved Domains (2) summary
    pfam02257
    Location:210 → 282
    RFX_DNA_binding; RFX DNA-binding domain
    pfam04589
    Location:77 → 159
    RFX1_trans_act; RFX1 transcription activation region

  3. XM_026781167.1 → XP_026636968.1  transcription factor RFX3 isoform X3

    UniProtKB/TrEMBL
    A0A8J6H370
    Related
    ENSMOCP00000021649.1, ENSMOCT00000025486.1
    Conserved Domains (2) summary
    pfam02257
    Location:184 → 256
    RFX_DNA_binding; RFX DNA-binding domain
    pfam04589
    Location:51 → 133
    RFX1_trans_act; RFX1 transcription activation region
Nucleotide Protein
Heading Accession and Version

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