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Oat ornithine aminotransferase [ Microtus ochrogaster (prairie vole) ]

Gene ID: 101989174, updated on 8-Mar-2024

Summary

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Gene symbol
Oat
Gene description
ornithine aminotransferase
See related
Ensembl:ENSMOCG00000020929
Gene type
protein coding
RefSeq status
MODEL
Organism
Microtus ochrogaster
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Microtus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
10
Annotation release Status Assembly Chr Location
102 current MicOch1.0 (GCF_000317375.1) 8 NC_022015.1 (25382078..25401843, complement)

Chromosome 8 - NC_022015.1Genomic Context describing neighboring genes Neighboring gene carboxypeptidase X, M14 family member 2 Neighboring gene 40S ribosomal protein S26-like Neighboring gene carbohydrate sulfotransferase 15 Neighboring gene NK1 homeobox 2 Neighboring gene phospholysine phosphohistidine inorganic pyrophosphate phosphatase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_022015.1 Chromosome 8 Reference MicOch1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables identical protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ornithine aminotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in arginine catabolic process to glutamate IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in arginine catabolic process to proline via ornithine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ornithine aminotransferase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microtus ochrogaster Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MicOch1.0

Genomic

  1. NC_022015.1 Reference MicOch1.0

    Range
    25382078..25401843 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005351395.3 → XP_005351452.1  ornithine aminotransferase, mitochondrial

    UniProtKB/TrEMBL
    A0A8J6G992
    Related
    ENSMOCP00000024539.1, ENSMOCT00000028401.1
    Conserved Domains (1) summary
    TIGR01885
    Location:40 → 437
    Orn_aminotrans; ornithine aminotransferase

  2. XM_026781538.1 → XP_026637339.1  ornithine aminotransferase, mitochondrial

    UniProtKB/TrEMBL
    A0A8J6G992
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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