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Eef1d eukaryotic translation elongation factor 1 delta [ Microtus ochrogaster (prairie vole) ]

Gene ID: 101988538, updated on 8-Mar-2024

Summary

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Gene symbol
Eef1d
Gene description
eukaryotic translation elongation factor 1 delta
See related
Ensembl:ENSMOCG00000010950
Gene type
protein coding
RefSeq status
MODEL
Organism
Microtus ochrogaster
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Microtus
Orthologs
human mouse all
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Genomic context

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See Eef1d in Genome Data Viewer
Location:
chromosome: 15
Exon count:
13
Annotation release Status Assembly Chr Location
102 current MicOch1.0 (GCF_000317375.1) 15 NC_022017.1 (10599645..10614313, complement)

Chromosome 15 - NC_022017.1Genomic Context describing neighboring genes Neighboring gene maestro heat like repeat family member 6 Neighboring gene nicotinate phosphoribosyltransferase Neighboring gene pyrroline-5-carboxylate reductase 3 Neighboring gene GDP-L-fucose synthase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_022017.1 Chromosome 15 Reference MicOch1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation elongation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translational elongation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of eukaryotic translation elongation factor 1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
elongation factor 1-delta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microtus ochrogaster Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MicOch1.0

Genomic

  1. NC_022017.1 Reference MicOch1.0

    Range
    10599645..10614313 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026782553.1 → XP_026638354.1  elongation factor 1-delta isoform X5

    UniProtKB/TrEMBL
    A0A8J6KYC2

  2. XM_026782550.1 → XP_026638351.1  elongation factor 1-delta isoform X2

    UniProtKB/TrEMBL
    A0A8J6KYC2

  3. XM_013348755.2 → XP_013204209.2  elongation factor 1-delta isoform X4

    UniProtKB/TrEMBL
    A0A8J6KYC2
    Related
    ENSMOCP00000010708.1, ENSMOCT00000014052.1
    Conserved Domains (1) summary
    pfam00736
    Location:584 → 667
    EF1_GNE; EF-1 guanine nucleotide exchange domain

  4. XM_026782549.1 → XP_026638350.1  elongation factor 1-delta isoform X1

    UniProtKB/TrEMBL
    A0A8J6KYC2
    Conserved Domains (1) summary
    pfam00736
    Location:603 → 686
    EF1_GNE; EF-1 guanine nucleotide exchange domain

  5. XM_026782556.1 → XP_026638357.1  elongation factor 1-delta isoform X6

    Conserved Domains (3) summary
    pfam00736
    Location:217 → 300
    EF1_GNE; EF-1 guanine nucleotide exchange domain
    pfam10587
    Location:178 → 205
    EF-1_beta_acid; Eukaryotic elongation factor 1 beta central acidic region
    pfam15799
    Location:86 → 135
    CCD48; Coiled-coil domain-containing protein 48

  6. XM_026782552.1 → XP_026638353.1  elongation factor 1-delta isoform X3

    UniProtKB/TrEMBL
    A0A8J6KYC2
    Related
    ENSMOCP00000010711.1, ENSMOCT00000014056.1

  7. XM_026782555.1 → XP_026638356.1  elongation factor 1-delta isoform X6

    Conserved Domains (3) summary
    pfam00736
    Location:217 → 300
    EF1_GNE; EF-1 guanine nucleotide exchange domain
    pfam10587
    Location:178 → 205
    EF-1_beta_acid; Eukaryotic elongation factor 1 beta central acidic region
    pfam15799
    Location:86 → 135
    CCD48; Coiled-coil domain-containing protein 48

  8. XM_026782551.1 → XP_026638352.1  elongation factor 1-delta isoform X3

    UniProtKB/TrEMBL
    A0A8J6KYC2

  9. XM_005354062.3 → XP_005354119.1  elongation factor 1-delta isoform X7

    See identical proteins and their annotated locations for XP_005354119.1

    Related
    ENSMOCP00000010704.1, ENSMOCT00000014048.1
    Conserved Domains (1) summary
    pfam00736
    Location:198 → 281
    EF1_GNE; EF-1 guanine nucleotide exchange domain

  10. XM_026782554.1 → XP_026638355.1  elongation factor 1-delta isoform X6

  11. XM_026782557.1 → XP_026638358.1  elongation factor 1-delta isoform X6

    Related
    ENSMOCP00000010714.1, ENSMOCT00000014060.1
    Conserved Domains (3) summary
    pfam00736
    Location:217 → 300
    EF1_GNE; EF-1 guanine nucleotide exchange domain
    pfam10587
    Location:178 → 205
    EF-1_beta_acid; Eukaryotic elongation factor 1 beta central acidic region
    pfam15799
    Location:86 → 135
    CCD48; Coiled-coil domain-containing protein 48

  12. XM_005354063.3 → XP_005354120.1  elongation factor 1-delta isoform X7

    See identical proteins and their annotated locations for XP_005354120.1

    Conserved Domains (1) summary
    pfam00736
    Location:198 → 281
    EF1_GNE; EF-1 guanine nucleotide exchange domain
Nucleotide Protein
Heading Accession and Version

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