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Spag6 sperm associated antigen 6 [ Microtus ochrogaster (prairie vole) ]

Gene ID: 101987328, updated on 8-Mar-2024

Summary

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Gene symbol
Spag6
Gene description
sperm associated antigen 6
See related
Ensembl:ENSMOCG00000012127
Gene type
protein coding
RefSeq status
MODEL
Organism
Microtus ochrogaster
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Microtus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 16
Exon count:
11
Annotation release Status Assembly Chr Location
102 current MicOch1.0 (GCF_000317375.1) 16 NC_022018.1 (6136104..6196064)

Chromosome 16 - NC_022018.1Genomic Context describing neighboring genes Neighboring gene COMM domain containing 3 Neighboring gene BMI1 proto-oncogene, polycomb ring finger Neighboring gene 60S ribosomal protein L34 pseudogene Neighboring gene phosphatidylinositol-5-phosphate 4-kinase type 2 alpha Neighboring gene uncharacterized LOC101988723

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_022018.1 Chromosome 16 Reference MicOch1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables microtubule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in epithelial cilium movement involved in extracellular fluid movement IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in filopodium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron projection extension IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sperm axoneme assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in acrosomal vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in axoneme IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microtubule cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sperm principal piece IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sperm-associated antigen 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microtus ochrogaster Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MicOch1.0

Genomic

  1. NC_022018.1 Reference MicOch1.0

    Range
    6136104..6196064
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005354665.3 → XP_005354722.1  sperm-associated antigen 6 isoform X1

    UniProtKB/TrEMBL
    A0A8J6KMT4
    Related
    ENSMOCP00000011865.1, ENSMOCT00000015574.1
    Conserved Domains (3) summary
    cd00020
    Location:161 → 279
    ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
    sd00044
    Location:289 → 325
    HEAT; HEAT repeat [structural motif]
    sd00043
    Location:162 → 194
    ARM; armadillo repeat [structural motif]

  2. XM_026782828.1 → XP_026638629.1  sperm-associated antigen 6 isoform X2

    UniProtKB/TrEMBL
    A0A8J6KMT4
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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