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Sms spermine synthase [ Microtus ochrogaster (prairie vole) ]

Gene ID: 101983451, updated on 8-Mar-2024

Summary

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Gene symbol
Sms
Gene description
spermine synthase
See related
Ensembl:ENSMOCG00000016092
Gene type
protein coding
RefSeq status
MODEL
Organism
Microtus ochrogaster
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Microtus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: X
Exon count:
14
Annotation release Status Assembly Chr Location
102 current MicOch1.0 (GCF_000317375.1) X NC_022026.1 (52034291..52105678)

Chromosome X - NC_022026.1Genomic Context describing neighboring genes Neighboring gene small muscle protein X-linked Neighboring gene membrane-bound transcription factor site-2 protease Neighboring gene phosphate regulating endopeptidase X-linked Neighboring gene heat shock cognate 71 kDa protein pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_022026.1 Chromosome X Reference MicOch1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables spermine synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in spermine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
spermine synthase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microtus ochrogaster Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MicOch1.0

Genomic

  1. NC_022026.1 Reference MicOch1.0

    Range
    52034291..52105678
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005358815.2 → XP_005358872.1  spermine synthase isoform X2

    Related
    ENSMOCP00000017521.1, ENSMOCT00000021311.1
    Conserved Domains (3) summary
    pfam01564
    Location:176 → 365
    Spermine_synth; Spermine/spermidine synthase domain
    pfam17284
    Location:123 → 172
    Spermine_synt_N; Spermidine synthase tetramerisation domain
    pfam17950
    Location:21 → 117
    SpmSyn_N; S-adenosylmethionine decarboxylase N -terminal

  2. XM_026784868.1 → XP_026640669.1  spermine synthase isoform X1

    Conserved Domains (3) summary
    pfam01564
    Location:142 → 331
    Spermine_synth; Spermine/spermidine synthase domain
    pfam17284
    Location:89 → 138
    Spermine_synt_N; Spermidine synthase tetramerisation domain
    pfam17950
    Location:1 → 83
    SpmSyn_N; S-adenosylmethionine decarboxylase N -terminal

  3. XM_026784867.1 → XP_026640668.1  spermine synthase isoform X1

    Conserved Domains (3) summary
    pfam01564
    Location:142 → 331
    Spermine_synth; Spermine/spermidine synthase domain
    pfam17284
    Location:89 → 138
    Spermine_synt_N; Spermidine synthase tetramerisation domain
    pfam17950
    Location:1 → 83
    SpmSyn_N; S-adenosylmethionine decarboxylase N -terminal

  4. XM_013350606.2 → XP_013206060.2  spermine synthase isoform X1

    Conserved Domains (3) summary
    pfam01564
    Location:142 → 331
    Spermine_synth; Spermine/spermidine synthase domain
    pfam17284
    Location:89 → 138
    Spermine_synt_N; Spermidine synthase tetramerisation domain
    pfam17950
    Location:1 → 83
    SpmSyn_N; S-adenosylmethionine decarboxylase N -terminal
Nucleotide Protein
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