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Afg1l AFG1 like ATPase [ Microtus ochrogaster (prairie vole) ]

Gene ID: 101983007, updated on 8-Mar-2024

Summary

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Gene symbol
Afg1l
Gene description
AFG1 like ATPase
See related
Ensembl:ENSMOCG00000022771
Gene type
protein coding
RefSeq status
MODEL
Organism
Microtus ochrogaster
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Microtus
Also known as
Lace1
Orthologs
human mouse all
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Genomic context

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See Afg1l in Genome Data Viewer
Location:
chromosome: LG9
Exon count:
14
Annotation release Status Assembly LG Location
102 current MicOch1.0 (GCF_000317375.1) LG9 NC_022034.1 (28030233..28179306, complement)

Linkage Group LG9 - NC_022034.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L10-like Neighboring gene forkhead box O3 Neighboring gene sorting nexin 3 Neighboring gene nuclear receptor subfamily 2 group E member 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_022034.1 Chromosome LG9 Reference MicOch1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
AFG1-like ATPase
Names
lactation elevated 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microtus ochrogaster Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MicOch1.0

Genomic

  1. NC_022034.1 Reference MicOch1.0

    Range
    28030233..28179306 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005363575.3 → XP_005363632.1  AFG1-like ATPase isoform X1

    Related
    ENSMOCP00000027199.1, ENSMOCT00000031102.1
    Conserved Domains (2) summary
    COG1485
    Location:75 → 471
    YhcM; Predicted ATPase [General function prediction only]
    cl21455
    Location:75 → 471
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

  2. XM_026787400.1 → XP_026643201.1  AFG1-like ATPase isoform X2

    Conserved Domains (1) summary
    COG1485
    Location:1 → 328
    YhcM; Predicted ATPase [General function prediction only]

  3. XM_026787401.1 → XP_026643202.1  AFG1-like ATPase isoform X2

    Conserved Domains (1) summary
    COG1485
    Location:1 → 328
    YhcM; Predicted ATPase [General function prediction only]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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