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Ankef1 ankyrin repeat and EF-hand domain containing 1 [ Ictidomys tridecemlineatus (thirteen-lined ground squirrel) ]

Gene ID: 101977984, updated on 8-Mar-2024

Summary

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Gene symbol
Ankef1
Gene description
ankyrin repeat and EF-hand domain containing 1
Locus tag
H1C71_017830
See related
EnsemblRapid:ENSSTOG00015006222
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictidomys tridecemlineatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
103 current HiC_Itri_2 (GCF_016881025.1) Unplaced Scaffold NW_024408640.1 (161009529..161036376, complement)
102 previous assembly SpeTri2.0 (GCF_000236235.1) Unplaced Scaffold NW_004936485.1 (9446425..9462724, complement)

NW_024408640.1Genomic Context describing neighboring genes Neighboring gene MKKS centrosomal shuttling protein Neighboring gene synaptosome associated protein 25 Neighboring gene uncharacterized LOC120886167 Neighboring gene p21 (RAC1) activated kinase 5 Neighboring gene lysosomal associated membrane protein family member 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ankyrin repeat and EF-hand domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ictidomys tridecemlineatus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HiC_Itri_2 Primary Assembly

Genomic

  1. NW_024408640.1 Reference HiC_Itri_2 Primary Assembly

    Range
    161009529..161036376 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040274030.1 → XP_040129964.1  ankyrin repeat and EF-hand domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    I3M502
    Conserved Domains (3) summary
    PHA02875
    Location:481 → 706
    PHA02875; ankyrin repeat protein; Provisional
    sd00045
    Location:527 → 555
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:529 → 621
    Ank_2; Ankyrin repeats (3 copies)

  2. XM_040274029.1 → XP_040129963.1  ankyrin repeat and EF-hand domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    I3M502
    Conserved Domains (3) summary
    PHA02875
    Location:481 → 706
    PHA02875; ankyrin repeat protein; Provisional
    sd00045
    Location:527 → 555
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:529 → 621
    Ank_2; Ankyrin repeats (3 copies)

  3. XM_040274033.1 → XP_040129967.1  ankyrin repeat and EF-hand domain-containing protein 1 isoform X4

    Conserved Domains (3) summary
    PHA02874
    Location:5 → 98
    PHA02874; ankyrin repeat protein; Provisional
    COG0666
    Location:332 → 461
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:338 → 366
    ANK; ANK repeat [structural motif]

  4. XM_013356449.3 → XP_013211903.1  ankyrin repeat and EF-hand domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    I3M502
    Related
    ENSSTOP00015007575.1, ENSSTOT00015008359.1
    Conserved Domains (3) summary
    PHA02875
    Location:481 → 706
    PHA02875; ankyrin repeat protein; Provisional
    sd00045
    Location:527 → 555
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:529 → 621
    Ank_2; Ankyrin repeats (3 copies)

  5. XM_040274032.1 → XP_040129966.1  ankyrin repeat and EF-hand domain-containing protein 1 isoform X3

    Conserved Domains (3) summary
    PHA02874
    Location:8 → 109
    PHA02874; ankyrin repeat protein; Provisional
    COG0666
    Location:343 → 472
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:349 → 377
    ANK; ANK repeat [structural motif]

  6. XM_040274031.1 → XP_040129965.1  ankyrin repeat and EF-hand domain-containing protein 1 isoform X2

    Conserved Domains (3) summary
    PHA02874
    Location:8 → 109
    PHA02874; ankyrin repeat protein; Provisional
    COG0666
    Location:343 → 472
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:349 → 377
    ANK; ANK repeat [structural motif]
Nucleotide Protein
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