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Rabl2b RAB, member of RAS oncogene family like 2B [ Ictidomys tridecemlineatus (thirteen-lined ground squirrel) ]

Gene ID: 101973851, updated on 8-Mar-2024

Summary

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Gene symbol
Rabl2b
Gene description
RAB, member of RAS oncogene family like 2B
Locus tag
H1C71_011935
See related
EnsemblRapid:ENSSTOG00015016570
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictidomys tridecemlineatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
103 current HiC_Itri_2 (GCF_016881025.1) Unplaced Scaffold NW_024404945.1 (60900..75273)
102 previous assembly SpeTri2.0 (GCF_000236235.1) Unplaced Scaffold NW_004936629.1 (60924..75273)

NW_024404945.1Genomic Context describing neighboring genes Neighboring gene proteasome subunit alpha type-3-like Neighboring gene acrosin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rab-like protein 2B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ictidomys tridecemlineatus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HiC_Itri_2 Primary Assembly

Genomic

  1. NW_024404945.1 Reference HiC_Itri_2 Primary Assembly

    Range
    60900..75273
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013362745.3 → XP_013218199.1  rab-like protein 2B isoform X1

    UniProtKB/TrEMBL
    I3M0Z3
    Conserved Domains (1) summary
    cd04124
    Location:22 → 182
    RabL2; Rab GTPase-like family 2 (Rab-like2)

  2. XM_040276023.1 → XP_040131957.1  rab-like protein 2B isoform X1

    UniProtKB/TrEMBL
    I3M0Z3
    Conserved Domains (1) summary
    cd04124
    Location:22 → 182
    RabL2; Rab GTPase-like family 2 (Rab-like2)

  3. XM_021733018.2 → XP_021588693.1  rab-like protein 2B isoform X1

    UniProtKB/TrEMBL
    I3M0Z3
    Conserved Domains (1) summary
    cd04124
    Location:22 → 182
    RabL2; Rab GTPase-like family 2 (Rab-like2)

  4. XM_040276043.1 → XP_040131977.1  rab-like protein 2B isoform X3

    Conserved Domains (1) summary
    cl38936
    Location:22 → 157
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

  5. XM_040276047.1 → XP_040131981.1  rab-like protein 2B isoform X4

    Conserved Domains (1) summary
    cl38936
    Location:22 → 154
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

  6. XM_021733016.1 → XP_021588691.1  rab-like protein 2B isoform X1

    UniProtKB/TrEMBL
    I3M0Z3
    Conserved Domains (1) summary
    cd04124
    Location:22 → 182
    RabL2; Rab GTPase-like family 2 (Rab-like2)

  7. XM_021733019.1 → XP_021588694.1  rab-like protein 2B isoform X2

    Conserved Domains (1) summary
    cd04124
    Location:22 → 181
    RabL2; Rab GTPase-like family 2 (Rab-like2)

  8. XM_021733017.1 → XP_021588692.1  rab-like protein 2B isoform X1

    UniProtKB/TrEMBL
    I3M0Z3
    Related
    ENSSTOP00015020346.1, ENSSTOT00015022274.1
    Conserved Domains (1) summary
    cd04124
    Location:22 → 182
    RabL2; Rab GTPase-like family 2 (Rab-like2)

  9. XM_013362744.3 → XP_013218198.1  rab-like protein 2B isoform X1

    UniProtKB/TrEMBL
    I3M0Z3
    Conserved Domains (1) summary
    cd04124
    Location:22 → 182
    RabL2; Rab GTPase-like family 2 (Rab-like2)

  10. XM_040276032.1 → XP_040131966.1  rab-like protein 2B isoform X1

    UniProtKB/TrEMBL
    I3M0Z3
    Conserved Domains (1) summary
    cd04124
    Location:22 → 182
    RabL2; Rab GTPase-like family 2 (Rab-like2)

  11. XM_040276049.1 → XP_040131983.1  rab-like protein 2B isoform X5

    Conserved Domains (1) summary
    cl38936
    Location:8 → 90
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

  12. XM_040276052.1 → XP_040131986.1  rab-like protein 2B isoform X6

    Conserved Domains (1) summary
    cl38936
    Location:8 → 89
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
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