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Ccdc169 coiled-coil domain containing 169 [ Ictidomys tridecemlineatus (thirteen-lined ground squirrel) ]

Gene ID: 101971652, updated on 8-Mar-2024

Summary

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Gene symbol
Ccdc169
Gene description
coiled-coil domain containing 169
Locus tag
H1C71_014683
See related
EnsemblRapid:ENSSTOG00015009444
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictidomys tridecemlineatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
103 current HiC_Itri_2 (GCF_016881025.1) Unplaced Scaffold NW_024404945.1 (165489818..165536454)
102 previous assembly SpeTri2.0 (GCF_000236235.1) Unplaced Scaffold NW_004936472.1 (30413870..30462309, complement)

NW_024404945.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110598739 Neighboring gene spartin Neighboring gene spermatogenesis and oogenesis specific basic helix-loop-helix 2 Neighboring gene uncharacterized LOC120888479 Neighboring gene doublecortin like kinase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
coiled-coil domain-containing protein 169

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ictidomys tridecemlineatus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HiC_Itri_2 Primary Assembly

Genomic

  1. NW_024404945.1 Reference HiC_Itri_2 Primary Assembly

    Range
    165489818..165536454
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040281599.1 → XP_040137533.1  coiled-coil domain-containing protein 169 isoform X2

  2. XM_005317102.4 → XP_005317159.1  coiled-coil domain-containing protein 169 isoform X1

    UniProtKB/TrEMBL
    A0A287CST5
    Related
    ENSSTOP00015011618.1, ENSSTOT00015012749.1
    Conserved Domains (1) summary
    pfam15372
    Location:54 → 181
    DUF4600; Domain of unknown function (DUF4600)

  3. XM_040281605.1 → XP_040137539.1  coiled-coil domain-containing protein 169 isoform X4

  4. XM_040281606.1 → XP_040137540.1  coiled-coil domain-containing protein 169 isoform X4

  5. XM_040281600.1 → XP_040137534.1  coiled-coil domain-containing protein 169 isoform X3

  6. XM_040281603.1 → XP_040137537.1  coiled-coil domain-containing protein 169 isoform X3

  7. XM_040281604.1 → XP_040137538.1  coiled-coil domain-containing protein 169 isoform X3

  8. XM_040281601.1 → XP_040137535.1  coiled-coil domain-containing protein 169 isoform X3

Nucleotide Protein
Heading Accession and Version

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