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Sez6l seizure related 6 homolog like [ Ictidomys tridecemlineatus (thirteen-lined ground squirrel) ]

Gene ID: 101971358, updated on 8-Mar-2024

Summary

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Gene symbol
Sez6l
Gene description
seizure related 6 homolog like
Locus tag
H1C71_005306
See related
EnsemblRapid:ENSSTOG00015014070
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictidomys tridecemlineatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
103 current HiC_Itri_2 (GCF_016881025.1) Unplaced Scaffold NW_024405118.1 (114856491..114914367, complement)
102 previous assembly SpeTri2.0 (GCF_000236235.1) Unplaced Scaffold NW_004936657.1 (956340..1014558)

NW_024405118.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110599204 Neighboring gene aspartate beta-hydroxylase domain containing 2 Neighboring gene uncharacterized LOC120892026 Neighboring gene uncharacterized LOC120892027

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in synapse maturation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuronal cell body IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
seizure 6-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ictidomys tridecemlineatus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HiC_Itri_2 Primary Assembly

Genomic

  1. NW_024405118.1 Reference HiC_Itri_2 Primary Assembly

    Range
    114856491..114914367 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021733776.2 → XP_021589451.2  seizure 6-like protein

    UniProtKB/TrEMBL
    I3ML21
    Related
    ENSSTOP00015017284.1, ENSSTOT00015018949.1
    Conserved Domains (3) summary
    cd00033
    Location:403 → 461
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    PHA02927
    Location:581 → 766
    PHA02927; secreted complement-binding protein; Provisional
    cd00041
    Location:464 → 572
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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