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Ino80c INO80 complex subunit C [ Ictidomys tridecemlineatus (thirteen-lined ground squirrel) ]

Gene ID: 101969765, updated on 8-Mar-2024

Summary

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Gene symbol
Ino80c
Gene description
INO80 complex subunit C
Locus tag
H1C71_036571
See related
EnsemblRapid:ENSSTOG00015000799
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictidomys tridecemlineatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
103 current HiC_Itri_2 (GCF_016881025.1) Unplaced Scaffold NW_024404944.1 (50305491..50322123)
102 previous assembly SpeTri2.0 (GCF_000236235.1) Unplaced Scaffold NW_004936517.1 (9632870..9649525)

NW_024404944.1Genomic Context describing neighboring genes Neighboring gene mitochondrial ribosomal protein S17 Neighboring gene 60S ribosomal protein L17-like Neighboring gene U6 spliceosomal RNA Neighboring gene zinc finger protein 396 Neighboring gene lysocardiolipin acyltransferase 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Ino80 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
INO80 complex subunit C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ictidomys tridecemlineatus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HiC_Itri_2 Primary Assembly

Genomic

  1. NW_024404944.1 Reference HiC_Itri_2 Primary Assembly

    Range
    50305491..50322123
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005325572.2 → XP_005325629.1  INO80 complex subunit C isoform X1

    UniProtKB/TrEMBL
    I3MR29
    Related
    ENSSTOP00015000958.1, ENSSTOT00015001060.1
    Conserved Domains (1) summary
    cl02154
    Location:83 → 187
    YL1_C; YL1 nuclear protein C-terminal domain

  2. XM_005325573.4 → XP_005325630.1  INO80 complex subunit C isoform X2

    Conserved Domains (1) summary
    cl02154
    Location:75 → 179
    YL1_C; YL1 nuclear protein C-terminal domain

  3. XM_013358719.3 → XP_013214173.1  INO80 complex subunit C isoform X3

    Conserved Domains (1) summary
    cl02154
    Location:33 → 137
    YL1_C; YL1 nuclear protein C-terminal domain
Nucleotide Protein
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