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Htr7 5-hydroxytryptamine receptor 7 [ Ictidomys tridecemlineatus (thirteen-lined ground squirrel) ]

Gene ID: 101968941, updated on 8-Mar-2024

Summary

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Gene symbol
Htr7
Gene description
5-hydroxytryptamine receptor 7
See related
EnsemblRapid:ENSSTOG00015008822
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictidomys tridecemlineatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
103 current HiC_Itri_2 (GCF_016881025.1) Unplaced Scaffold NW_024407213.1 (41937016..42106548)
102 previous assembly SpeTri2.0 (GCF_000236235.1) Unplaced Scaffold NW_004936601.1 (3569626..3626782)

NW_024407213.1Genomic Context describing neighboring genes Neighboring gene glyceraldehyde-3-phosphate dehydrogenase-like Neighboring gene small nucleolar RNA SNORA51 Neighboring gene ribonuclease P/MRP subunit p30 Neighboring gene U6 spliceosomal RNA Neighboring gene G-rich sequence factor 1-like Neighboring gene uncharacterized LOC120885655 Neighboring gene small nuclear ribonucleoprotein-associated proteins B and B'

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables G protein-coupled serotonin receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables neurotransmitter receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in circadian rhythm IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in smooth muscle contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vasoconstriction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in dendrite IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
5-hydroxytryptamine receptor 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ictidomys tridecemlineatus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HiC_Itri_2 Primary Assembly

Genomic

  1. NW_024407213.1 Reference HiC_Itri_2 Primary Assembly

    Range
    41937016..42106548
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021731951.2 → XP_021587626.1  5-hydroxytryptamine receptor 7 isoform X2

    UniProtKB/TrEMBL
    A0A287CTL1, I3N2Z9
    Conserved Domains (1) summary
    cd15329
    Location:82 → 395
    7tmA_5-HT7; serotonin receptor subtype 7, member of the class A family of seven-transmembrane G protein-coupled receptors

  2. XM_021731952.2 → XP_021587627.1  5-hydroxytryptamine receptor 7 isoform X3

    UniProtKB/TrEMBL
    A0A287CTL1
    Conserved Domains (1) summary
    cd15329
    Location:82 → 395
    7tmA_5-HT7; serotonin receptor subtype 7, member of the class A family of seven-transmembrane G protein-coupled receptors

  3. XM_021731950.2 → XP_021587625.1  5-hydroxytryptamine receptor 7 isoform X1

    UniProtKB/TrEMBL
    A0A287CTL1
    Related
    ENSSTOP00015010877.1, ENSSTOT00015011941.1
    Conserved Domains (1) summary
    cd15329
    Location:82 → 395
    7tmA_5-HT7; serotonin receptor subtype 7, member of the class A family of seven-transmembrane G protein-coupled receptors

  4. XM_040272951.1 → XP_040128885.1  5-hydroxytryptamine receptor 7 isoform X4

    Conserved Domains (2) summary
    cd14964
    Location:1 → 21
    7tm_GPCRs; TM helix 4 [structural motif]
    cl28897
    Location:1 → 197
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily

RNA

  1. XR_005728149.1 RNA Sequence

  2. XR_005728148.1 RNA Sequence

  3. XR_005728154.1 RNA Sequence

  4. XR_005728153.1 RNA Sequence

  5. XR_005728152.1 RNA Sequence

  6. XR_005728150.1 RNA Sequence

  7. XR_005728151.1 RNA Sequence

Nucleotide Protein
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