U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Itga3 integrin subunit alpha 3 [ Ictidomys tridecemlineatus (thirteen-lined ground squirrel) ]

Gene ID: 101962835, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
Itga3
Gene description
integrin subunit alpha 3
Locus tag
H1C71_022115
See related
EnsemblRapid:ENSSTOG00015018852
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictidomys tridecemlineatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
26
Annotation release Status Assembly Chr Location
103 current HiC_Itri_2 (GCF_016881025.1) Unplaced Scaffold NW_024405602.1 (25491793..25521235)
102 previous assembly SpeTri2.0 (GCF_000236235.1) Unplaced Scaffold NW_004936490.1 (11553904..11583387, complement)

NW_024405602.1Genomic Context describing neighboring genes Neighboring gene distal-less homeobox 4 Neighboring gene distal-less homeobox 3 Neighboring gene pyruvate dehydrogenase kinase 2 Neighboring gene sterile alpha motif domain containing 14

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion mediated by integrin IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-matrix adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in integrin-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in leukocyte migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of integrin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
integrin alpha-3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Ictidomys tridecemlineatus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HiC_Itri_2 Primary Assembly

Genomic

  1. NW_024405602.1 Reference HiC_Itri_2 Primary Assembly

    Range
    25491793..25521235
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005321678.4 → XP_005321735.1  integrin alpha-3 isoform X2

    UniProtKB/TrEMBL
    A0A287D3B6
    Related
    ENSSTOP00015023283.1, ENSSTOT00015025370.1
    Conserved Domains (2) summary
    smart00191
    Location:367 → 417
    Int_alpha; Integrin alpha (beta-propellor repeats)
    pfam08441
    Location:462 → 916
    Integrin_alpha2; Integrin alpha

  2. XM_005321677.4 → XP_005321734.1  integrin alpha-3 isoform X1

    UniProtKB/TrEMBL
    I3MNP1
    Related
    ENSSTOP00015023287.1, ENSSTOT00015025374.1
    Conserved Domains (2) summary
    smart00191
    Location:367 → 417
    Int_alpha; Integrin alpha (beta-propellor repeats)
    pfam08441
    Location:462 → 916
    Integrin_alpha2; Integrin alpha
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.