U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Lamb2 laminin subunit beta 2 [ Ictidomys tridecemlineatus (thirteen-lined ground squirrel) ]

Gene ID: 101962761, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
Lamb2
Gene description
laminin subunit beta 2
Locus tag
H1C71_023213
See related
EnsemblRapid:ENSSTOG00015020425
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictidomys tridecemlineatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Lamb2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
33
Annotation release Status Assembly Chr Location
103 current HiC_Itri_2 (GCF_016881025.1) Unplaced Scaffold NW_024405602.1 (64065681..64080848, complement)
102 previous assembly SpeTri2.0 (GCF_000236235.1) Unplaced Scaffold NW_004936529.1 (826178..841304, complement)

NW_024405602.1Genomic Context describing neighboring genes Neighboring gene glutaminyl-tRNA synthetase 1 Neighboring gene ubiquitin specific peptidase 19 Neighboring gene heterogeneous nuclear ribonucleoprotein A1-like Neighboring gene coiled-coil domain containing 71 Neighboring gene kelch domain containing 8B Neighboring gene interactor of HORMAD1 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables extracellular matrix structural constituent IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in basement membrane assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in substrate adhesion-dependent cell spreading IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in basement membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of laminin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
laminin subunit beta-2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Ictidomys tridecemlineatus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HiC_Itri_2 Primary Assembly

Genomic

  1. NW_024405602.1 Reference HiC_Itri_2 Primary Assembly

    Range
    64065681..64080848 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005326904.4 → XP_005326961.2  laminin subunit beta-2 isoform X1

    UniProtKB/TrEMBL
    I3LZD4
    Related
    ENSSTOP00015025204.1, ENSSTOT00015027413.1
    Conserved Domains (4) summary
    smart00136
    Location:89 → 329
    LamNT; Laminin N-terminal domain (domain VI)
    smart00180
    Location:1143 → 1188
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    COG1196
    Location:1250 → 1830
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd00055
    Location:830 → 880
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...

  2. XM_040269682.1 → XP_040125616.1  laminin subunit beta-2 isoform X2

    Conserved Domains (4) summary
    smart00180
    Location:943 → 988
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    COG1196
    Location:1050 → 1630
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd00055
    Location:630 → 680
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cl02806
    Location:2 → 129
    Laminin_N; Laminin N-terminal (Domain VI)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.