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Stag3 STAG3 cohesin complex component [ Ictidomys tridecemlineatus (thirteen-lined ground squirrel) ]

Gene ID: 101960293, updated on 8-Mar-2024

Summary

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Gene symbol
Stag3
Gene description
STAG3 cohesin complex component
Locus tag
H1C71_029563
See related
EnsemblRapid:ENSSTOG00015020203
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictidomys tridecemlineatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys
Orthologs
human mouse all
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Genomic context

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See Stag3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
32
Annotation release Status Assembly Chr Location
103 current HiC_Itri_2 (GCF_016881025.1) Unplaced Scaffold NW_024409344.1 (133578049..133603974, complement)
102 previous assembly SpeTri2.0 (GCF_000236235.1) Unplaced Scaffold NW_004936543.1 (430804..458112)

NW_024409344.1Genomic Context describing neighboring genes Neighboring gene paired immunoglobin like type 2 receptor alpha Neighboring gene PVR related immunoglobulin domain containing Neighboring gene glypican 2 Neighboring gene galactose-3-O-sulfotransferase 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chromatin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in sister chromatid cohesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of cohesin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cohesin subunit SA-3
Names
stromal antigen 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ictidomys tridecemlineatus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HiC_Itri_2 Primary Assembly

Genomic

  1. NW_024409344.1 Reference HiC_Itri_2 Primary Assembly

    Range
    133578049..133603974 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040278008.1 → XP_040133942.1  cohesin subunit SA-3 isoform X2

    UniProtKB/TrEMBL
    I3MHM4
    Conserved Domains (1) summary
    cl26728
    Location:23 → 328
    STAG; STAG domain

  2. XM_040278009.1 → XP_040133943.1  cohesin subunit SA-3 isoform X3

    UniProtKB/TrEMBL
    I3MHM4
    Conserved Domains (1) summary
    cl26728
    Location:23 → 328
    STAG; STAG domain

  3. XM_005328576.2 → XP_005328633.2  cohesin subunit SA-3 isoform X1

    UniProtKB/TrEMBL
    I3MHM4
    Related
    ENSSTOP00015024891.1, ENSSTOT00015027081.1
    Conserved Domains (1) summary
    cl26728
    Location:23 → 328
    STAG; STAG domain
Nucleotide Protein
Heading Accession and Version

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