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Znf395 zinc finger protein 395 [ Ictidomys tridecemlineatus (thirteen-lined ground squirrel) ]

Gene ID: 101960139, updated on 8-Mar-2024

Summary

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Gene symbol
Znf395
Gene description
zinc finger protein 395
Locus tag
H1C71_040596
See related
EnsemblRapid:ENSSTOG00015000477
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictidomys tridecemlineatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
103 current HiC_Itri_2 (GCF_016881025.1) Unplaced Scaffold NW_024404943.1 (7434534..7444895)
102 previous assembly SpeTri2.0 (GCF_000236235.1) Unplaced Scaffold NW_004936675.1 (1141169..1162394, complement)

NW_024404943.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L39-like Neighboring gene uncharacterized LOC120892346 Neighboring gene uncharacterized LOC120892344 Neighboring gene prepronociceptin Neighboring gene sphingolipid delta(4)-desaturase DES1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 395

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ictidomys tridecemlineatus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HiC_Itri_2 Primary Assembly

Genomic

  1. NW_024404943.1 Reference HiC_Itri_2 Primary Assembly

    Range
    7434534..7444895
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040292336.1 → XP_040148270.1  zinc finger protein 395 isoform X2

    UniProtKB/TrEMBL
    I3LYI1
    Conserved Domains (1) summary
    pfam15997
    Location:38 → 144
    DUF4772; Domain of unknown function (DUF4772)

  2. XM_021734502.2 → XP_021590177.2  zinc finger protein 395 isoform X1

    UniProtKB/TrEMBL
    I3LYI1
    Related
    ENSSTOP00015000554.1, ENSSTOT00015000625.1
    Conserved Domains (1) summary
    pfam15997
    Location:38 → 144
    DUF4772; Domain of unknown function (DUF4772)
Nucleotide Protein
Heading Accession and Version

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