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GM18_0111 DNA ligase D [ Geobacter sp. M18 ]

Gene ID: 10195675, discontinued on 4-Feb-2015
  • All Gene records for this genome have been discontinued due to a change in scope for prokaryotic genomes in Gene. At the time this Gene record was discontinued, the RefSeq genome was re-annotated with the following features at this location:
Gene symbol
GM18_0111
Gene description
DNA ligase D
Locus tag
GM18_0111
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Geobacter sp. M18 (strain: M18)
Lineage
Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

  • Non-homologous end-joining, organism-specific biosystem (from KEGG)
    Non-homologous end-joining, organism-specific biosystemNonhomologous end joining (NHEJ) eliminates DNA double-strand breaks (DSBs) by direct ligation. NHEJ involves binding of the KU heterodimer to double-stranded DNA ends, recruitment of DNA-PKcs (MRX c...
  • Non-homologous end-joining, conserved biosystem (from KEGG)
    Non-homologous end-joining, conserved biosystemNonhomologous end joining (NHEJ) eliminates DNA double-strand breaks (DSBs) by direct ligation. NHEJ involves binding of the KU heterodimer to double-stranded DNA ends, recruitment of DNA-PKcs (MRX c...
Names
DNA ligase D
YP_004196876.1
  • KEGG: gem:GM21_0109 DNA ligase D
    TIGRFAM: DNA ligase D; DNA ligase D, 3'-phosphoesterase domain protein; DNA polymerase LigD, ligase domain protein; DNA polymerase LigD, polymerase domain protein
    PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; DNA primase small subunit

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_014973.1 Reference assembly

    Range
    129051..131729 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_004196876.1 DNA ligase D [Geobacter sp. M18]

    Status: PROVISIONAL