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Armc5 armadillo repeat containing 5 [ Ictidomys tridecemlineatus (thirteen-lined ground squirrel) ]

Gene ID: 101955980, updated on 8-Mar-2024

Summary

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Gene symbol
Armc5
Gene description
armadillo repeat containing 5
Locus tag
H1C71_029312
See related
EnsemblRapid:ENSSTOG00015021752
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictidomys tridecemlineatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys
Orthologs
human mouse all
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Genomic context

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See Armc5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
103 current HiC_Itri_2 (GCF_016881025.1) Unplaced Scaffold NW_024409344.1 (125674012..125681772)
102 previous assembly SpeTri2.0 (GCF_000236235.1) Unplaced Scaffold NW_004936543.1 (8354795..8366123, complement)

NW_024409344.1Genomic Context describing neighboring genes Neighboring gene integrin subunit alpha D Neighboring gene cytochrome c oxidase subunit 6A2, mitochondrial Neighboring gene transforming growth factor beta 1 induced transcript 1 Neighboring gene solute carrier family 5 member 2 Neighboring gene RUS family member 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in anatomical structure morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
armadillo repeat-containing protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ictidomys tridecemlineatus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HiC_Itri_2 Primary Assembly

Genomic

  1. NW_024409344.1 Reference HiC_Itri_2 Primary Assembly

    Range
    125674012..125681772
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005328565.4 → XP_005328622.1  armadillo repeat-containing protein 5

    UniProtKB/TrEMBL
    I3M214
    Related
    ENSSTOP00015026871.1, ENSSTOT00015029205.1
    Conserved Domains (2) summary
    sd00043
    Location:147 → 179
    ARM; armadillo repeat [structural motif]
    cl38908
    Location:747 → 842
    BTB_POZ; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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