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MYLIP myosin regulatory light chain interacting protein [ Chrysemys picta (Painted turtle) ]

Gene ID: 101945055, updated on 8-Mar-2024

Summary

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Gene symbol
MYLIP
Gene description
myosin regulatory light chain interacting protein
See related
Ensembl:ENSCPBG00000022369
Gene type
protein coding
RefSeq status
MODEL
Organism
Chrysemys picta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Chrysemys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
103 current Chrysemys_picta_BioNano-3.0.4 (GCF_000241765.4) Unplaced Scaffold NW_024885778.1 (20372515..20395700)
102 previous assembly Chrysemys_picta_bellii-3.0.3 (GCF_000241765.3) Unplaced Scaffold NW_007281519.1 (1477694..1500848)

NW_024885778.1Genomic Context describing neighboring genes Neighboring gene jumonji and AT-rich interaction domain containing 2 Neighboring gene dystrobrevin binding protein 1 Neighboring gene uncharacterized LOC122174713 Neighboring gene uncharacterized LOC103306535 Neighboring gene guanosine monophosphate reductase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cytoskeletal protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin-protein transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase MYLIP

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chrysemys picta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Chrysemys_picta_BioNano-3.0.4 Primary Assembly

Genomic

  1. NW_024885778.1 Reference Chrysemys_picta_BioNano-3.0.4 Primary Assembly

    Range
    20372515..20395700
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042860508.1 → XP_042716442.1  E3 ubiquitin-protein ligase MYLIP isoform X2

    Conserved Domains (4) summary
    smart00295
    Location:10 → 195
    B41; Band 4.1 homologues
    cd16523
    Location:336 → 373
    RING-HC_MYLIP; RING finger, HC subclass, found in myosin regulatory light chain interacting protein (MYLIP) and similar proteins
    cd17104
    Location:6 → 86
    FERM_F1_MYLIP; FERM (Four.1 protein, Ezrin, Radixin, Moesin) domain, F1 sub-domain, found in E3 ubiquitin-protein ligase MYLIP and similar proteins
    cl17171
    Location:190 → 245
    PH-like; Pleckstrin homology-like domain

  2. XM_005308566.3 → XP_005308623.1  E3 ubiquitin-protein ligase MYLIP isoform X1

    UniProtKB/TrEMBL
    A0A8C3IET1
    Related
    ENSCPBP00000031850.1
    Conserved Domains (5) summary
    smart00295
    Location:10 → 195
    B41; Band 4.1 homologues
    cd13195
    Location:190 → 300
    FERM_C_MYLIP_IDOL; FERM domain C-lobe of E3 ubiquitin ligase myosin regulatory light chain-interacting protein (MYLIP; also called inducible degrader of the LDL receptor, IDOL)
    pfam00373
    Location:90 → 195
    FERM_M; FERM central domain
    pfam09379
    Location:10 → 72
    FERM_N; FERM N-terminal domain
    pfam13920
    Location:388 → 433
    zf-C3HC4_3; Zinc finger, C3HC4 type (RING finger)
Nucleotide Protein
Heading Accession and Version

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