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DTNB dystrobrevin beta [ Chrysemys picta (Painted turtle) ]

Gene ID: 101944684, updated on 8-Mar-2024

Summary

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Gene symbol
DTNB
Gene description
dystrobrevin beta
See related
Ensembl:ENSCPBG00000010813
Gene type
protein coding
RefSeq status
MODEL
Organism
Chrysemys picta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Chrysemys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
25
Annotation release Status Assembly Chr Location
103 current Chrysemys_picta_BioNano-3.0.4 (GCF_000241765.4) Unplaced Scaffold NW_024885794.1 (2004865..2352775)
102 previous assembly Chrysemys_picta_bellii-3.0.3 (GCF_000241765.3) Unplaced Scaffold NW_007281472.1 (2004934..2352929)

NW_024885794.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112060239 Neighboring gene ASXL transcriptional regulator 2 Neighboring gene cleavage stimulation factor subunit 1 Neighboring gene DNA methyltransferase 3 alpha Neighboring gene dihydropyrimidinase like 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in synaptic signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dystrobrevin beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chrysemys picta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Chrysemys_picta_BioNano-3.0.4 Primary Assembly

Genomic

  1. NW_024885794.1 Reference Chrysemys_picta_BioNano-3.0.4 Primary Assembly

    Range
    2004865..2352775
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005284131.4 → XP_005284188.1  dystrobrevin beta isoform X6

    UniProtKB/TrEMBL
    A0A8C3FVC3
    Related
    ENSCPBP00000014563.1
    Conserved Domains (4) summary
    cd02334
    Location:241 → 289
    ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
    pfam09068
    Location:16 → 140
    EF-hand_2; EF hand
    pfam09069
    Location:144 → 232
    EF-hand_3; EF-hand
    pfam13874
    Location:404 → 487
    Nup54; Nucleoporin complex subunit 54

  2. XM_005284130.4 → XP_005284187.1  dystrobrevin beta isoform X5

    UniProtKB/TrEMBL
    A0A8C3FVB4
    Related
    ENSCPBP00000014551.1
    Conserved Domains (4) summary
    cd02334
    Location:241 → 289
    ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
    pfam09068
    Location:16 → 140
    EF-hand_2; EF hand
    pfam09069
    Location:144 → 232
    EF-hand_3; EF-hand
    pfam13874
    Location:408 → 491
    Nup54; Nucleoporin complex subunit 54

  3. XM_005284133.4 → XP_005284190.1  dystrobrevin beta isoform X8

    UniProtKB/TrEMBL
    A0A8C3HBJ0
    Related
    ENSCPBP00000014572.1
    Conserved Domains (4) summary
    cd02334
    Location:241 → 289
    ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
    pfam09068
    Location:16 → 140
    EF-hand_2; EF hand
    pfam09069
    Location:144 → 232
    EF-hand_3; EF-hand
    pfam13874
    Location:378 → 461
    Nup54; Nucleoporin complex subunit 54

  4. XM_042861467.1 → XP_042717401.1  dystrobrevin beta isoform X1

    UniProtKB/TrEMBL
    A0A8C3FVA3
    Conserved Domains (4) summary
    PRK12704
    Location:431 → 525
    PRK12704; phosphodiesterase; Provisional
    cd02334
    Location:241 → 289
    ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
    cd15901
    Location:54 → 95
    EFh_DMD_DYTN_DTN; EF-hand-like motif [structural motif]
    cl07621
    Location:54 → 214
    EFh_DMD_DYTN_DTN; EF-hand-like motif found in the dystrophin/dystrobrevin/dystrotelin family

  5. XM_005284125.4 → XP_005284182.1  dystrobrevin beta isoform X1

    See identical proteins and their annotated locations for XP_005284182.1

    UniProtKB/TrEMBL
    A0A8C3FVA3
    Conserved Domains (4) summary
    PRK12704
    Location:431 → 525
    PRK12704; phosphodiesterase; Provisional
    cd02334
    Location:241 → 289
    ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
    cd15901
    Location:54 → 95
    EFh_DMD_DYTN_DTN; EF-hand-like motif [structural motif]
    cl07621
    Location:54 → 214
    EFh_DMD_DYTN_DTN; EF-hand-like motif found in the dystrophin/dystrobrevin/dystrotelin family

  6. XM_005284132.4 → XP_005284189.1  dystrobrevin beta isoform X7

    UniProtKB/TrEMBL
    A0A8C3FVC3
    Conserved Domains (4) summary
    cd02334
    Location:241 → 289
    ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
    pfam09068
    Location:16 → 140
    EF-hand_2; EF hand
    pfam09069
    Location:144 → 232
    EF-hand_3; EF-hand
    pfam13874
    Location:404 → 489
    Nup54; Nucleoporin complex subunit 54

  7. XM_005284124.4 → XP_005284181.1  dystrobrevin beta isoform X1

    See identical proteins and their annotated locations for XP_005284181.1

    UniProtKB/TrEMBL
    A0A8C3FVA3
    Conserved Domains (4) summary
    PRK12704
    Location:431 → 525
    PRK12704; phosphodiesterase; Provisional
    cd02334
    Location:241 → 289
    ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
    cd15901
    Location:54 → 95
    EFh_DMD_DYTN_DTN; EF-hand-like motif [structural motif]
    cl07621
    Location:54 → 214
    EFh_DMD_DYTN_DTN; EF-hand-like motif found in the dystrophin/dystrobrevin/dystrotelin family

  8. XM_005284128.4 → XP_005284185.1  dystrobrevin beta isoform X3

    See identical proteins and their annotated locations for XP_005284185.1

    UniProtKB/TrEMBL
    A0A8C3FVA3, A0A8C3FWK7
    Conserved Domains (4) summary
    cd02334
    Location:241 → 289
    ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
    pfam09068
    Location:16 → 140
    EF-hand_2; EF hand
    pfam09069
    Location:144 → 232
    EF-hand_3; EF-hand
    cl23720
    Location:442 → 524
    RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)

  9. XM_005284127.4 → XP_005284184.1  dystrobrevin beta isoform X3

    See identical proteins and their annotated locations for XP_005284184.1

    UniProtKB/TrEMBL
    A0A8C3FVA3, A0A8C3FWK7
    Related
    ENSCPBP00000014544.1
    Conserved Domains (4) summary
    cd02334
    Location:241 → 289
    ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
    pfam09068
    Location:16 → 140
    EF-hand_2; EF hand
    pfam09069
    Location:144 → 232
    EF-hand_3; EF-hand
    cl23720
    Location:442 → 524
    RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)

  10. XM_042861469.1 → XP_042717403.1  dystrobrevin beta isoform X4

    UniProtKB/TrEMBL
    A0A8C3FVA3, A0A8C3FVK9
    Conserved Domains (3) summary
    PRK12704
    Location:431 → 525
    PRK12704; phosphodiesterase; Provisional
    cd02334
    Location:241 → 289
    ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
    cd16250
    Location:54 → 214
    EFh_DTNB; EF-hand-like motif found in beta-dystrobrevin

  11. XM_005284126.4 → XP_005284183.1  dystrobrevin beta isoform X2

    UniProtKB/TrEMBL
    A0A8C3FVA3
    Related
    ENSCPBP00000014536.1
    Conserved Domains (4) summary
    cd02334
    Location:241 → 289
    ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
    pfam09068
    Location:16 → 140
    EF-hand_2; EF hand
    pfam09069
    Location:144 → 232
    EF-hand_3; EF-hand
    pfam13874
    Location:434 → 519
    Nup54; Nucleoporin complex subunit 54

  12. XM_005284129.4 → XP_005284186.1  dystrobrevin beta isoform X4

    UniProtKB/TrEMBL
    A0A8C3FVA3, A0A8C3FVK9
    Related
    ENSCPBP00000014528.1
    Conserved Domains (3) summary
    PRK12704
    Location:431 → 525
    PRK12704; phosphodiesterase; Provisional
    cd02334
    Location:241 → 289
    ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
    cd16250
    Location:54 → 214
    EFh_DTNB; EF-hand-like motif found in beta-dystrobrevin

  13. XM_042861470.1 → XP_042717404.1  dystrobrevin beta isoform X9

    UniProtKB/TrEMBL
    A0A8C3FVA3
    Conserved Domains (5) summary
    COG1196
    Location:380 → 473
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    PRK00286
    Location:297 → 461
    xseA; exodeoxyribonuclease VII large subunit; Reviewed
    cd02334
    Location:184 → 232
    ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
    cd15901
    Location:1 → 37
    EFh_DMD_DYTN_DTN; EF-hand-like motif [structural motif]
    cl07621
    Location:1 → 157
    EFh_DMD_DYTN_DTN; EF-hand-like motif found in the dystrophin/dystrobrevin/dystrotelin family

RNA

  1. XR_002889554.2 RNA Sequence

  2. XR_002889553.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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