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AP3S1 adaptor related protein complex 3 subunit sigma 1 [ Chrysemys picta (Painted turtle) ]

Gene ID: 101940214, updated on 8-Mar-2024

Summary

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Gene symbol
AP3S1
Gene description
adaptor related protein complex 3 subunit sigma 1
See related
Ensembl:ENSCPBG00000001702
Gene type
protein coding
RefSeq status
MODEL
Organism
Chrysemys picta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Chrysemys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
103 current Chrysemys_picta_BioNano-3.0.4 (GCF_000241765.4) Unplaced Scaffold NW_024885705.1 (17864082..17905379, complement)
102 previous assembly Chrysemys_picta_bellii-3.0.3 (GCF_000241765.3) 8 NC_024225.1 (41504925..41546206)

NW_024885705.1Genomic Context describing neighboring genes Neighboring gene ADP ribosylation factor like GTPase 14 effector protein like Neighboring gene laeverin Neighboring gene autophagy related 12 Neighboring gene cysteine dioxygenase type 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in Golgi to vacuole transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of AP-3 adaptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of membrane coat IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
AP-3 complex subunit sigma-1
Names
adaptor related protein complex 3 sigma 1 subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chrysemys picta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Chrysemys_picta_BioNano-3.0.4 Primary Assembly

Genomic

  1. NW_024885705.1 Reference Chrysemys_picta_BioNano-3.0.4 Primary Assembly

    Range
    17864082..17905379 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005300138.4 → XP_005300195.1  AP-3 complex subunit sigma-1 isoform X1

    See identical proteins and their annotated locations for XP_005300195.1

    UniProtKB/TrEMBL
    A0A8C3H5L0, A0A8C3H628
    Related
    ENSCPBP00000002114.1
    Conserved Domains (1) summary
    cd14834
    Location:1 → 146
    AP3_sigma; AP-3 complex subunit sigma

  2. XM_005300139.4 → XP_005300196.1  AP-3 complex subunit sigma-1 isoform X2

    See identical proteins and their annotated locations for XP_005300196.1

    UniProtKB/TrEMBL
    A0A8C3F3J0, A0A8C3F4F9
    Related
    ENSCPBP00000002121.1
    Conserved Domains (1) summary
    cd14834
    Location:1 → 146
    AP3_sigma; AP-3 complex subunit sigma
Nucleotide Protein
Heading Accession and Version

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