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ANKRD28 ankyrin repeat domain 28 [ Chrysemys picta (Painted turtle) ]

Gene ID: 101940033, updated on 8-Mar-2024

Summary

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Gene symbol
ANKRD28
Gene description
ankyrin repeat domain 28
See related
Ensembl:ENSCPBG00000022533
Gene type
protein coding
RefSeq status
MODEL
Organism
Chrysemys picta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Chrysemys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
30
Annotation release Status Assembly Chr Location
103 current Chrysemys_picta_BioNano-3.0.4 (GCF_000241765.4) 2 NC_024219.2 (64481927..64697314, complement)
102 previous assembly Chrysemys_picta_bellii-3.0.3 (GCF_000241765.3) 2 NC_024219.1 (14392025..14608612, complement)

Chromosome 2 - NC_024219.2Genomic Context describing neighboring genes Neighboring gene 2-hydroxyacyl-CoA lyase 1 Neighboring gene uncharacterized LOC122174838 Neighboring gene biotinidase Neighboring gene uncharacterized LOC122174839 Neighboring gene uncharacterized LOC122174840 Neighboring gene polypeptide N-acetylgalactosaminyltransferase 15 Neighboring gene diphthamide biosynthesis 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chrysemys picta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Chrysemys_picta_BioNano-3.0.4 Primary Assembly

Genomic

  1. NC_024219.2 Reference Chrysemys_picta_BioNano-3.0.4 Primary Assembly

    Range
    64481927..64697314 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042861928.1 → XP_042717862.1  serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A isoform X4

    Conserved Domains (5) summary
    PHA02874
    Location:526 → 835
    PHA02874; ankyrin repeat protein; Provisional
    PHA03095
    Location:158 → 426
    PHA03095; ankyrin-like protein; Provisional
    COG0666
    Location:368 → 489
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:48 → 76
    ANK; ANK repeat [structural motif]
    cl39094
    Location:27 → 273
    Ank_2; Ankyrin repeats (3 copies)

  2. XM_005297028.4 → XP_005297085.1  serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A isoform X3

    UniProtKB/TrEMBL
    A0A8C3ID73
    Related
    ENSCPBP00000032103.1
    Conserved Domains (5) summary
    cd00204
    Location:134 → 259
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam00023
    Location:42 → 71
    Ank; Ankyrin repeat
    pfam12796
    Location:177 → 269
    Ank_2; Ankyrin repeats (3 copies)
    pfam13637
    Location:339 → 392
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:76 → 104
    ANK; ANK repeat [structural motif]

  3. XM_042861915.1 → XP_042717849.1  serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A isoform X1

    Conserved Domains (5) summary
    PHA02874
    Location:588 → 897
    PHA02874; ankyrin repeat protein; Provisional
    PHA03095
    Location:56 → 344
    PHA03095; ankyrin-like protein; Provisional
    COG0666
    Location:430 → 551
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:110 → 138
    ANK; ANK repeat [structural motif]
    cl39094
    Location:799 → 1003
    Ank_2; Ankyrin repeats (3 copies)

  4. XM_005297026.4 → XP_005297083.1  serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A isoform X2

    UniProtKB/TrEMBL
    A0A8C3IDZ2
    Related
    ENSCPBP00000032105.1
    Conserved Domains (5) summary
    cd00204
    Location:164 → 289
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam00023
    Location:72 → 101
    Ank; Ankyrin repeat
    pfam12796
    Location:207 → 299
    Ank_2; Ankyrin repeats (3 copies)
    pfam13637
    Location:369 → 422
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:106 → 134
    ANK; ANK repeat [structural motif]

RNA

  1. XR_006177187.1 RNA Sequence

Nucleotide Protein
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