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CENPE centromere protein E [ Chrysemys picta (Painted turtle) ]

Gene ID: 101939236, updated on 8-Mar-2024

Summary

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Gene symbol
CENPE
Gene description
centromere protein E
Gene type
protein coding
RefSeq status
MODEL
Organism
Chrysemys picta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Chrysemys
Orthologs
human mouse all
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Genomic context

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See CENPE in Genome Data Viewer
Location:
chromosome: Un
Exon count:
46
Annotation release Status Assembly Chr Location
103 current Chrysemys_picta_BioNano-3.0.4 (GCF_000241765.4) Unplaced Scaffold NW_024885767.1 (5644401..5727818)
102 previous assembly Chrysemys_picta_bellii-3.0.3 (GCF_000241765.3) Unplaced Scaffold NW_007281378.1 (239084..322461, complement)

NW_024885767.1Genomic Context describing neighboring genes Neighboring gene tachykinin receptor 3 Neighboring gene radial spoke head protein 6 homolog A-like Neighboring gene 3-hydroxybutyrate dehydrogenase 2 Neighboring gene solute carrier family 9 member B2 Neighboring gene CDGSH iron sulfur domain 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables microtubule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables plus-end-directed microtubule motor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in microtubule-based movement IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in microtubule IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
centromere-associated protein E

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chrysemys picta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Chrysemys_picta_BioNano-3.0.4 Primary Assembly

Genomic

  1. NW_024885767.1 Reference Chrysemys_picta_BioNano-3.0.4 Primary Assembly

    Range
    5644401..5727818
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008170146.3 → XP_008168368.1  centromere-associated protein E isoform X1

    Conserved Domains (6) summary
    smart00129
    Location:6 → 337
    KISc; Kinesin motor, catalytic domain. ATPase
    COG1196
    Location:328 → 1158
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    COG5290
    Location:823 → 1049
    COG5290; IkappaB kinase complex, IKAP component [Transcription]
    TIGR04523
    Location:927 → 1676
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    cd01374
    Location:6 → 330
    KISc_CENP_E; Kinesin motor domain, CENP-E/KIP2-like subgroup
    pfam07851
    Location:848 → 939
    TMPIT; TMPIT-like protein

  2. XM_042859968.1 → XP_042715902.1  centromere-associated protein E isoform X3

    Conserved Domains (2) summary
    COG1196
    Location:752 → 1651
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd01374
    Location:6 → 330
    KISc_CENP_E; Kinesin motor domain, CENP-E/KIP2-like subgroup

  3. XM_042859967.1 → XP_042715901.1  centromere-associated protein E isoform X2

    Conserved Domains (3) summary
    COG0419
    Location:340 → 916
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    COG1196
    Location:727 → 1645
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd01374
    Location:6 → 330
    KISc_CENP_E; Kinesin motor domain, CENP-E/KIP2-like subgroup
Nucleotide Protein
Heading Accession and Version

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