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RCOR2 REST corepressor 2 [ Chrysemys picta (Painted turtle) ]

Gene ID: 101936396, updated on 8-Mar-2024

Summary

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Gene symbol
RCOR2
Gene description
REST corepressor 2
See related
Ensembl:ENSCPBG00000023509
Gene type
protein coding
RefSeq status
MODEL
Organism
Chrysemys picta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Chrysemys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
12
Annotation release Status Assembly Chr Location
103 current Chrysemys_picta_BioNano-3.0.4 (GCF_000241765.4) 5 NC_024222.2 (9414498..9426215, complement)
102 previous assembly Chrysemys_picta_bellii-3.0.3 (GCF_000241765.3) Unplaced Scaffold NW_007359864.1 (5392400..5403910)

Chromosome 5 - NC_024222.2Genomic Context describing neighboring genes Neighboring gene dual specificity protein phosphatase 10-like Neighboring gene microtubule affinity regulating kinase 2 Neighboring gene N-alpha-acetyltransferase 40, NatD catalytic subunit Neighboring gene actin, alpha skeletal muscle B-like Neighboring gene uncharacterized LOC101947332

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of histone deacetylase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
REST corepressor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chrysemys picta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Chrysemys_picta_BioNano-3.0.4 Primary Assembly

Genomic

  1. NC_024222.2 Reference Chrysemys_picta_BioNano-3.0.4 Primary Assembly

    Range
    9414498..9426215 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024100344.2 → XP_023956112.1  REST corepressor 2 isoform X1

    UniProtKB/TrEMBL
    A0A8C3PD12
    Related
    ENSCPBP00000033634.1
    Conserved Domains (3) summary
    pfam00249
    Location:337 → 380
    Myb_DNA-binding; Myb-like DNA-binding domain
    pfam01448
    Location:46 → 97
    ELM2; ELM2 domain
    cl21498
    Location:134 → 178
    SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...

  2. XM_024100345.2 → XP_023956113.1  REST corepressor 2 isoform X2

    UniProtKB/TrEMBL
    A0A8C3PD12
    Conserved Domains (3) summary
    pfam00249
    Location:293 → 336
    Myb_DNA-binding; Myb-like DNA-binding domain
    pfam01448
    Location:2 → 53
    ELM2; ELM2 domain
    cl21498
    Location:90 → 134
    SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...
Nucleotide Protein
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