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SDE2 SDE2 telomere maintenance homolog [ Chrysemys picta (Painted turtle) ]

Gene ID: 101935243, updated on 8-Mar-2024

Summary

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Gene symbol
SDE2
Gene description
SDE2 telomere maintenance homolog
See related
Ensembl:ENSCPBG00000011980
Gene type
protein coding
RefSeq status
MODEL
Organism
Chrysemys picta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Chrysemys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
7
Annotation release Status Assembly Chr Location
103 current Chrysemys_picta_BioNano-3.0.4 (GCF_000241765.4) 3 NC_024220.2 (82379805..82395969)
102 previous assembly Chrysemys_picta_bellii-3.0.3 (GCF_000241765.3) 3 NC_024220.1 (27559037..27575197)

Chromosome 3 - NC_024220.2Genomic Context describing neighboring genes Neighboring gene acyl-CoA binding domain containing 3 Neighboring gene histone H3.3A Neighboring gene left-right determination factor 2-like Neighboring gene transmembrane protein 63A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
replication stress response regulator SDE2
Names
protein SDE2 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chrysemys picta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Chrysemys_picta_BioNano-3.0.4 Primary Assembly

Genomic

  1. NC_024220.2 Reference Chrysemys_picta_BioNano-3.0.4 Primary Assembly

    Range
    82379805..82395969
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042848555.1 → XP_042704489.1  replication stress response regulator SDE2 isoform X1

    Conserved Domains (1) summary
    cl28922
    Location:65 → 142
    Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold

  2. XM_005289574.4 → XP_005289631.1  replication stress response regulator SDE2 isoform X2

    UniProtKB/TrEMBL
    A0A8C3HD16
    Related
    ENSCPBP00000016240.1
    Conserved Domains (2) summary
    pfam13297
    Location:336 → 395
    Telomere_Sde2_2; Telomere stability C-terminal
    cl00155
    Location:65 → 142
    UBQ; Ubiquitin-like proteins

  3. XM_042848556.1 → XP_042704490.1  replication stress response regulator SDE2 isoform X3

    Conserved Domains (1) summary
    cl28922
    Location:2 → 63
    Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold
Nucleotide Protein
Heading Accession and Version

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