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PRPF38A pre-mRNA processing factor 38A [ Chrysemys picta (Painted turtle) ]

Gene ID: 101934643, updated on 8-Mar-2024

Summary

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Gene symbol
PRPF38A
Gene description
pre-mRNA processing factor 38A
See related
Ensembl:ENSCPBG00000014791
Gene type
protein coding
RefSeq status
MODEL
Organism
Chrysemys picta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Chrysemys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
10
Annotation release Status Assembly Chr Location
103 current Chrysemys_picta_BioNano-3.0.4 (GCF_000241765.4) 8 NC_024225.2 (85910378..85915623)
102 previous assembly Chrysemys_picta_bellii-3.0.3 (GCF_000241765.3) Unplaced Scaffold NW_007281342.1 (5007863..5013111)

Chromosome 8 - NC_024225.2Genomic Context describing neighboring genes Neighboring gene coiled-coil and C2 domain containing 1B Neighboring gene origin recognition complex subunit 1 Neighboring gene terminal uridylyl transferase 4 Neighboring gene glutathione peroxidase 7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
part_of precatalytic spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pre-mRNA-splicing factor 38A
Names
PRP38 pre-mRNA processing factor 38 (yeast) domain containing A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chrysemys picta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Chrysemys_picta_BioNano-3.0.4 Primary Assembly

Genomic

  1. NC_024225.2 Reference Chrysemys_picta_BioNano-3.0.4 Primary Assembly

    Range
    85910378..85915623
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005284812.4 → XP_005284869.1  pre-mRNA-splicing factor 38A

    UniProtKB/TrEMBL
    A0A8C3HMZ8
    Related
    ENSCPBP00000020549.1
    Conserved Domains (1) summary
    pfam03371
    Location:10 → 172
    PRP38; PRP38 family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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