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SNAPC2 small nuclear RNA activating complex polypeptide 2 [ Chrysemys picta (Painted turtle) ]

Gene ID: 101932240, updated on 8-Mar-2024

Summary

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Gene symbol
SNAPC2
Gene description
small nuclear RNA activating complex polypeptide 2
See related
Ensembl:ENSCPBG00000002277
Gene type
protein coding
RefSeq status
MODEL
Organism
Chrysemys picta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Chrysemys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
103 current Chrysemys_picta_BioNano-3.0.4 (GCF_000241765.4) Unplaced Scaffold NW_024885709.1 (7620368..7628602, complement)
102 previous assembly Chrysemys_picta_bellii-3.0.3 (GCF_000241765.3) Unplaced Scaffold NW_007281663.1 (638816..646991)

NW_024885709.1Genomic Context describing neighboring genes Neighboring gene mucin-1-like Neighboring gene Rho guanine nucleotide exchange factor 40 Neighboring gene zinc finger protein 219 Neighboring gene uncharacterized LOC122174133 Neighboring gene centrosomal protein 250

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II general transcription initiation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in snRNA transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nuclear body IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
snRNA-activating protein complex subunit 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chrysemys picta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Chrysemys_picta_BioNano-3.0.4 Primary Assembly

Genomic

  1. NW_024885709.1 Reference Chrysemys_picta_BioNano-3.0.4 Primary Assembly

    Range
    7620368..7628602 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005294053.3 → XP_005294110.1  snRNA-activating protein complex subunit 2 isoform X1

    See identical proteins and their annotated locations for XP_005294110.1

    UniProtKB/TrEMBL
    A0A8C3F948
    Related
    ENSCPBP00000002825.1
    Conserved Domains (1) summary
    pfam11035
    Location:1 → 396
    SnAPC_2_like; Small nuclear RNA activating complex subunit 2, SNAP190 Myb

  2. XM_005294054.3 → XP_005294111.1  snRNA-activating protein complex subunit 2 isoform X2

    Conserved Domains (2) summary
    smart00717
    Location:26 → 77
    SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
    pfam11035
    Location:1 → 378
    SnAPC_2_like; Small nuclear RNA activating complex subunit 2, SNAP190 Myb

  3. XM_005294052.3 → XP_005294109.1  snRNA-activating protein complex subunit 2 isoform X1

    See identical proteins and their annotated locations for XP_005294109.1

    UniProtKB/TrEMBL
    A0A8C3F948
    Conserved Domains (1) summary
    pfam11035
    Location:1 → 396
    SnAPC_2_like; Small nuclear RNA activating complex subunit 2, SNAP190 Myb

  4. XM_042854929.1 → XP_042710863.1  snRNA-activating protein complex subunit 2 isoform X1

    UniProtKB/TrEMBL
    A0A8C3F948
    Conserved Domains (1) summary
    pfam11035
    Location:1 → 396
    SnAPC_2_like; Small nuclear RNA activating complex subunit 2, SNAP190 Myb

  5. XM_042854930.1 → XP_042710864.1  snRNA-activating protein complex subunit 2 isoform X3

    Conserved Domains (1) summary
    smart00717
    Location:26 → 77
    SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
Nucleotide Protein
Heading Accession and Version

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