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TARS3 threonyl-tRNA synthetase 3 [ Chrysemys picta (Painted turtle) ]

Gene ID: 101930879, updated on 8-Mar-2024

Summary

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Gene symbol
TARS3
Gene description
threonyl-tRNA synthetase 3
See related
Ensembl:ENSCPBG00000010792
Gene type
protein coding
RefSeq status
MODEL
Organism
Chrysemys picta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Chrysemys
Also known as
TARSL2
Orthologs
human mouse all
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Genomic context

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See TARS3 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
19
Annotation release Status Assembly Chr Location
103 current Chrysemys_picta_BioNano-3.0.4 (GCF_000241765.4) 9 NC_056657.1 (97912472..97942066)
102 previous assembly Chrysemys_picta_bellii-3.0.3 (GCF_000241765.3) Unplaced Scaffold NW_007359888.1 (4691785..4721108, complement)

Chromosome 9 - NC_056657.1Genomic Context describing neighboring genes Neighboring gene endosomal transmembrane epsin interactor 2 Neighboring gene uncharacterized LOC122174029 Neighboring gene tight junction protein 1 Neighboring gene uncharacterized LOC122174030 Neighboring gene uncharacterized LOC122174031 Neighboring gene TM2 domain containing 3 Neighboring gene adenosine deaminase like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables threonine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in threonyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
threonine--tRNA ligase 2, cytoplasmic
Names
threonyl-tRNA synthetase like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chrysemys picta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Chrysemys_picta_BioNano-3.0.4 Primary Assembly

Genomic

  1. NC_056657.1 Reference Chrysemys_picta_BioNano-3.0.4 Primary Assembly

    Range
    97912472..97942066
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005284978.4 → XP_005285035.1  threonine--tRNA ligase 2, cytoplasmic

    UniProtKB/TrEMBL
    A0A8C3FV87
    Related
    ENSCPBP00000014504.1
    Conserved Domains (5) summary
    cd01667
    Location:152 → 213
    TGS_ThrRS_N; TGS _ThrRS_N: ThrRS (threonyl-tRNA Synthetase) is a class II tRNA synthetase that couples threonine to its cognate tRNA. In addition to its catalytic and anticodon-binding domains, ThrRS has an N-terminal TGS domain, named after the ThrRS, GTPase, and ...
    PLN02908
    Location:120 → 784
    PLN02908; threonyl-tRNA synthetase
    smart00863
    Location:319 → 366
    tRNA_SAD; Threonyl and Alanyl tRNA synthetase second additional domain
    cd00771
    Location:390 → 687
    ThrRS_core; Threonyl-tRNA synthetase (ThrRS) class II core catalytic domain. ThrRS is a homodimer. It is responsible for the attachment of threonine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent ...
    cd00860
    Location:687 → 778
    ThrRS_anticodon; ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is ...
Nucleotide Protein
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