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FIP1L1 factor interacting with PAPOLA and CPSF1 [ Macaca fascicularis (crab-eating macaque) ]

Gene ID: 101925354, updated on 11-Apr-2024

Summary

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Gene symbol
FIP1L1
Gene description
factor interacting with PAPOLA and CPSF1
See related
Ensembl:ENSMFAG00000034699
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca fascicularis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
19
Annotation release Status Assembly Chr Location
102 current MFA1912RKSv2 (GCF_012559485.2) 5 NC_052259.1 (80093257..80166718, complement)
101 previous assembly Macaca_fascicularis_5.0 (GCF_000364345.1) 5 NC_022276.1 (81045756..81122555, complement)

Chromosome 5 - NC_052259.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107129744 Neighboring gene COMM domain-containing protein 5 Neighboring gene ligand of numb-protein X 1 Neighboring gene sec1 family domain containing 2 Neighboring gene U6 spliceosomal RNA Neighboring gene RAS like family 11 member B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Rate of evolution in brain-expressed genes in humans and other primates. Wang HY, et al. PLoS Biol, 2007 Feb. PMID 17194215, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mRNA cleavage and polyadenylation specificity factor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pre-mRNA 3'-end-processing factor FIP1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca fascicularis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MFA1912RKSv2 Primary Assembly

Genomic

  1. NC_052259.1 Reference MFA1912RKSv2 Primary Assembly

    Range
    80093257..80166718 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045393322.1 → XP_045249257.1  pre-mRNA 3'-end-processing factor FIP1 isoform X44

    Conserved Domains (1) summary
    pfam05182
    Location:139 → 181
    Fip1; Fip1 motif

  2. XM_045393320.1 → XP_045249255.1  pre-mRNA 3'-end-processing factor FIP1 isoform X41

    Conserved Domains (1) summary
    pfam05182
    Location:139 → 181
    Fip1; Fip1 motif

  3. XM_045393310.1 → XP_045249245.1  pre-mRNA 3'-end-processing factor FIP1 isoform X30

    Conserved Domains (1) summary
    pfam05182
    Location:139 → 181
    Fip1; Fip1 motif

  4. XM_045393328.1 → XP_045249263.1  pre-mRNA 3'-end-processing factor FIP1 isoform X49

  5. XM_045393306.1 → XP_045249241.1  pre-mRNA 3'-end-processing factor FIP1 isoform X25

    Conserved Domains (1) summary
    pfam05182
    Location:139 → 181
    Fip1; Fip1 motif

  6. XM_045393304.1 → XP_045249239.1  pre-mRNA 3'-end-processing factor FIP1 isoform X22

    Conserved Domains (1) summary
    pfam05182
    Location:139 → 181
    Fip1; Fip1 motif

  7. XM_005555288.3 → XP_005555345.1  pre-mRNA 3'-end-processing factor FIP1 isoform X43

    See identical proteins and their annotated locations for XP_005555345.1

    UniProtKB/TrEMBL
    A0A2K5W248
    Related
    ENSMFAP00000031086.1
    Conserved Domains (1) summary
    pfam05182
    Location:139 → 181
    Fip1; Fip1 motif

  8. XM_045393321.1 → XP_045249256.1  pre-mRNA 3'-end-processing factor FIP1 isoform X42

    Conserved Domains (1) summary
    pfam05182
    Location:139 → 181
    Fip1; Fip1 motif

  9. XM_045393319.1 → XP_045249254.1  pre-mRNA 3'-end-processing factor FIP1 isoform X40

    Conserved Domains (1) summary
    pfam05182
    Location:139 → 181
    Fip1; Fip1 motif

  10. XM_045393318.1 → XP_045249253.1  pre-mRNA 3'-end-processing factor FIP1 isoform X39

    Conserved Domains (1) summary
    pfam05182
    Location:139 → 181
    Fip1; Fip1 motif

  11. XM_045393309.1 → XP_045249244.1  pre-mRNA 3'-end-processing factor FIP1 isoform X29

    Conserved Domains (1) summary
    pfam05182
    Location:139 → 181
    Fip1; Fip1 motif

  12. XM_045393308.1 → XP_045249243.1  pre-mRNA 3'-end-processing factor FIP1 isoform X27

    Conserved Domains (1) summary
    pfam05182
    Location:139 → 181
    Fip1; Fip1 motif

  13. XM_015450470.2 → XP_015305956.1  pre-mRNA 3'-end-processing factor FIP1 isoform X24

    UniProtKB/TrEMBL
    A0A2K5W248
    Conserved Domains (1) summary
    pfam05182
    Location:139 → 181
    Fip1; Fip1 motif

  14. XM_045393301.1 → XP_045249236.1  pre-mRNA 3'-end-processing factor FIP1 isoform X19

    Conserved Domains (1) summary
    pfam05182
    Location:139 → 181
    Fip1; Fip1 motif

  15. XM_045393293.1 → XP_045249228.1  pre-mRNA 3'-end-processing factor FIP1 isoform X8

    Conserved Domains (1) summary
    pfam05182
    Location:139 → 181
    Fip1; Fip1 motif

  16. XM_045393314.1 → XP_045249249.1  pre-mRNA 3'-end-processing factor FIP1 isoform X35

    Conserved Domains (1) summary
    pfam05182
    Location:139 → 181
    Fip1; Fip1 motif

  17. XM_045393311.1 → XP_045249246.1  pre-mRNA 3'-end-processing factor FIP1 isoform X31

    Conserved Domains (1) summary
    pfam05182
    Location:139 → 181
    Fip1; Fip1 motif

  18. XM_045393327.1 → XP_045249262.1  pre-mRNA 3'-end-processing factor FIP1 isoform X48

  19. XM_045393297.1 → XP_045249232.1  pre-mRNA 3'-end-processing factor FIP1 isoform X14

    Conserved Domains (1) summary
    pfam05182
    Location:139 → 181
    Fip1; Fip1 motif

  20. XM_045393295.1 → XP_045249230.1  pre-mRNA 3'-end-processing factor FIP1 isoform X11

    Conserved Domains (1) summary
    pfam05182
    Location:139 → 181
    Fip1; Fip1 motif

  21. XM_005555283.3 → XP_005555340.1  pre-mRNA 3'-end-processing factor FIP1 isoform X9

    See identical proteins and their annotated locations for XP_005555340.1

    UniProtKB/TrEMBL
    A0A2K5W202, A0A2K5W248
    Related
    ENSMFAP00000031082.1
    Conserved Domains (1) summary
    pfam05182
    Location:139 → 181
    Fip1; Fip1 motif

  22. XM_045393292.1 → XP_045249227.1  pre-mRNA 3'-end-processing factor FIP1 isoform X7

    Conserved Domains (1) summary
    pfam05182
    Location:139 → 181
    Fip1; Fip1 motif

  23. XM_045393317.1 → XP_045249252.1  pre-mRNA 3'-end-processing factor FIP1 isoform X38

  24. XM_045393313.1 → XP_045249248.1  pre-mRNA 3'-end-processing factor FIP1 isoform X33

  25. XM_045393298.1 → XP_045249233.1  pre-mRNA 3'-end-processing factor FIP1 isoform X15

  26. XM_045393296.1 → XP_045249231.1  pre-mRNA 3'-end-processing factor FIP1 isoform X12

  27. XM_045393326.1 → XP_045249261.1  pre-mRNA 3'-end-processing factor FIP1 isoform X47

  28. XM_015450472.2 → XP_015305958.1  pre-mRNA 3'-end-processing factor FIP1 isoform X37

    UniProtKB/TrEMBL
    A0A2K5W248
    Conserved Domains (1) summary
    pfam05182
    Location:154 → 196
    Fip1; Fip1 motif

  29. XM_045393316.1 → XP_045249251.1  pre-mRNA 3'-end-processing factor FIP1 isoform X36

  30. XM_045393329.1 → XP_045249264.1  pre-mRNA 3'-end-processing factor FIP1 isoform X50

  31. XM_005555287.3 → XP_005555344.1  pre-mRNA 3'-end-processing factor FIP1 isoform X34

    See identical proteins and their annotated locations for XP_005555344.1

    UniProtKB/TrEMBL
    A0A2K5W248
    Conserved Domains (1) summary
    pfam05182
    Location:154 → 196
    Fip1; Fip1 motif

  32. XM_045393312.1 → XP_045249247.1  pre-mRNA 3'-end-processing factor FIP1 isoform X32

    Conserved Domains (1) summary
    pfam05182
    Location:154 → 196
    Fip1; Fip1 motif

  33. XM_015450469.2 → XP_015305955.1  pre-mRNA 3'-end-processing factor FIP1 isoform X17

    UniProtKB/TrEMBL
    A0A2K5W248
    Conserved Domains (1) summary
    pfam05182
    Location:154 → 196
    Fip1; Fip1 motif

  34. XM_045393299.1 → XP_045249234.1  pre-mRNA 3'-end-processing factor FIP1 isoform X16

  35. XM_045393323.1 → XP_045249258.1  pre-mRNA 3'-end-processing factor FIP1 isoform X45

  36. XM_005555284.3 → XP_005555341.1  pre-mRNA 3'-end-processing factor FIP1 isoform X13

    See identical proteins and their annotated locations for XP_005555341.1

    UniProtKB/TrEMBL
    A0A2K5W248
    Conserved Domains (1) summary
    pfam05182
    Location:154 → 196
    Fip1; Fip1 motif

  37. XM_045393294.1 → XP_045249229.1  pre-mRNA 3'-end-processing factor FIP1 isoform X10

    Conserved Domains (1) summary
    pfam05182
    Location:154 → 196
    Fip1; Fip1 motif

  38. XM_045393305.1 → XP_045249240.1  pre-mRNA 3'-end-processing factor FIP1 isoform X23

  39. XM_045393302.1 → XP_045249237.1  pre-mRNA 3'-end-processing factor FIP1 isoform X20

  40. XM_045393290.1 → XP_045249225.1  pre-mRNA 3'-end-processing factor FIP1 isoform X4

  41. XM_045393289.1 → XP_045249224.1  pre-mRNA 3'-end-processing factor FIP1 isoform X2

  42. XM_015450471.2 → XP_015305957.1  pre-mRNA 3'-end-processing factor FIP1 isoform X28

    UniProtKB/TrEMBL
    A0A2K5W1Z4, A0A2K5W248
    Conserved Domains (1) summary
    pfam05182
    Location:154 → 196
    Fip1; Fip1 motif

  43. XM_045393307.1 → XP_045249242.1  pre-mRNA 3'-end-processing factor FIP1 isoform X26

    Conserved Domains (1) summary
    pfam05182
    Location:154 → 196
    Fip1; Fip1 motif

  44. XM_005555285.3 → XP_005555342.1  pre-mRNA 3'-end-processing factor FIP1 isoform X21

    See identical proteins and their annotated locations for XP_005555342.1

    UniProtKB/TrEMBL
    A0A2K5W200, A0A2K5W248
    Conserved Domains (1) summary
    pfam05182
    Location:154 → 196
    Fip1; Fip1 motif

  45. XM_045393300.1 → XP_045249235.1  pre-mRNA 3'-end-processing factor FIP1 isoform X18

    Conserved Domains (1) summary
    pfam05182
    Location:154 → 196
    Fip1; Fip1 motif

  46. XM_005555282.3 → XP_005555339.1  pre-mRNA 3'-end-processing factor FIP1 isoform X6

    See identical proteins and their annotated locations for XP_005555339.1

    UniProtKB/TrEMBL
    A0A2K5W211, A0A2K5W248
    Related
    ENSMFAP00000031100.1
    Conserved Domains (1) summary
    pfam05182
    Location:154 → 196
    Fip1; Fip1 motif

  47. XM_045393291.1 → XP_045249226.1  pre-mRNA 3'-end-processing factor FIP1 isoform X5

    Conserved Domains (1) summary
    pfam05182
    Location:154 → 196
    Fip1; Fip1 motif

  48. XM_045393325.1 → XP_045249260.1  pre-mRNA 3'-end-processing factor FIP1 isoform X46

  49. XM_005555281.3 → XP_005555338.1  pre-mRNA 3'-end-processing factor FIP1 isoform X3

    See identical proteins and their annotated locations for XP_005555338.1

    UniProtKB/TrEMBL
    A0A2K5W248
    Related
    ENSMFAP00000031093.1
    Conserved Domains (1) summary
    pfam05182
    Location:154 → 196
    Fip1; Fip1 motif

  50. XM_045393288.1 → XP_045249223.1  pre-mRNA 3'-end-processing factor FIP1 isoform X1

    Conserved Domains (1) summary
    pfam05182
    Location:154 → 196
    Fip1; Fip1 motif
Nucleotide Protein
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