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CALB1 calbindin 1 [ Macaca fascicularis (crab-eating macaque) ]

Gene ID: 101867411, updated on 8-Mar-2024

Summary

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Gene symbol
CALB1
Gene description
calbindin 1
See related
Ensembl:ENSMFAG00000000695
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca fascicularis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
11
Annotation release Status Assembly Chr Location
102 current MFA1912RKSv2 (GCF_012559485.2) 8 NC_052262.1 (87833979..87858840, complement)
101 previous assembly Macaca_fascicularis_5.0 (GCF_000364345.1) 8 NC_022279.1 (91209914..91234782, complement)

Chromosome 8 - NC_052262.1Genomic Context describing neighboring genes Neighboring gene translation initiation factor IF-2-like Neighboring gene oxidative stress induced growth inhibitor family member 2 Neighboring gene nibrin Neighboring gene 2,4-dienoyl-CoA reductase 1 Neighboring gene transmembrane protein 64 Neighboring gene uncharacterized LOC123575239 Neighboring gene N-terminal EF-hand calcium binding protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Rate of evolution in brain-expressed genes in humans and other primates. Wang HY, et al. PLoS Biol, 2007 Feb. PMID 17194215, Free PMC Article
  2. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of long-term synaptic potentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of presynaptic cytosolic calcium ion concentration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in dendrite IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in dendritic spine IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in terminal bouton IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calbindin
Names
Vitamin D-dependent calcium-binding protein, avian-type

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca fascicularis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MFA1912RKSv2 Primary Assembly

Genomic

  1. NC_052262.1 Reference MFA1912RKSv2 Primary Assembly

    Range
    87833979..87858840 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045398481.1 → XP_045254416.1  calbindin

    UniProtKB/TrEMBL
    A0A2K5X935, A0A8J8YD31, G7PC68
    Conserved Domains (1) summary
    cd16176
    Location:16 → 259
    EFh_HEF_CB; EF-hand, calcium binding motif, found in calbindin (CB)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001284560.1: Suppressed sequence

    Description
    NM_001284560.1: This RefSeq record was removed as a result of standard genome annotation processing. Contact info@ncbi.nlm.nih.gov for further information.
Nucleotide Protein
Heading Accession and Version

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