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Nrp2 neuropilin 2 [ Mesocricetus auratus (golden hamster) ]

Gene ID: 101841068, updated on 8-Mar-2024

Summary

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Gene symbol
Nrp2
Gene description
neuropilin 2
See related
EnsemblRapid:ENSMAUG00000020662
Gene type
protein coding
RefSeq status
MODEL
Organism
Mesocricetus auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
103 current BCM_Maur_2.0 (GCF_017639785.1) Unplaced Scaffold NW_024429194.1 (44986658..45103060, complement)
102 previous assembly MesAur1.0 (GCF_000349665.1) Unplaced Scaffold NW_004801627.1 (15876782..15979374, complement)

NW_024429194.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121142634 Neighboring gene uncharacterized LOC121142635 Neighboring gene uncharacterized LOC110340953 Neighboring gene par-3 family cell polarity regulator beta Neighboring gene uncharacterized LOC121142810

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly, annotation, and characterization of the whole brain transcriptome of male and female Syrian hamsters. McCann KE, et al. Sci Rep, 2017 Jan 10. PMID 28071753, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables semaphorin receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables vascular endothelial growth factor receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in angiogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vascular endothelial growth factor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
neuropilin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mesocricetus auratus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Maur_2.0 Primary Assembly

Genomic

  1. NW_024429194.1 Reference BCM_Maur_2.0 Primary Assembly

    Range
    44986658..45103060 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040753469.1 → XP_040609403.1  neuropilin-2 isoform X1

    UniProtKB/TrEMBL
    A0A1U7QQ02
    Related
    ENSMAUP00000023576.2, ENSMAUT00000027587.2
    Conserved Domains (3) summary
    smart00137
    Location:641 → 794
    MAM; Domain in meprin, A5, receptor protein tyrosine phosphatase mu (and others)
    cd00041
    Location:28 → 141
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    cd00057
    Location:280 → 426
    FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain; Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes.

  2. XM_040753470.1 → XP_040609404.1  neuropilin-2 isoform X2

    UniProtKB/TrEMBL
    A0A1U7QQ02
    Related
    ENSMAUP00000055047.1, ENSMAUT00000045840.1
    Conserved Domains (3) summary
    smart00137
    Location:641 → 794
    MAM; Domain in meprin, A5, receptor protein tyrosine phosphatase mu (and others)
    cd00041
    Location:28 → 141
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    cd00057
    Location:280 → 426
    FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain; Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes.

  3. XM_040753473.1 → XP_040609407.1  neuropilin-2 isoform X5

    UniProtKB/TrEMBL
    A0A1U7QQ02
    Conserved Domains (3) summary
    smart00137
    Location:523 → 676
    MAM; Domain in meprin, A5, receptor protein tyrosine phosphatase mu (and others)
    cd00041
    Location:31 → 147
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    cd00057
    Location:162 → 308
    FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain; Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes.

  4. XM_040753471.1 → XP_040609405.1  neuropilin-2 isoform X3

    UniProtKB/TrEMBL
    A0A1U7QQ02
    Conserved Domains (3) summary
    smart00137
    Location:641 → 794
    MAM; Domain in meprin, A5, receptor protein tyrosine phosphatase mu (and others)
    cd00041
    Location:28 → 141
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    cd00057
    Location:280 → 426
    FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain; Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes.

  5. XM_040753472.1 → XP_040609406.1  neuropilin-2 isoform X4

    UniProtKB/TrEMBL
    A0A1U7QQ02
    Related
    ENSMAUP00000023579.2, ENSMAUT00000027590.2
    Conserved Domains (3) summary
    smart00137
    Location:641 → 794
    MAM; Domain in meprin, A5, receptor protein tyrosine phosphatase mu (and others)
    cd00041
    Location:28 → 141
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    cd00057
    Location:280 → 426
    FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain; Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes.
Nucleotide Protein
Heading Accession and Version

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