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Phactr2 phosphatase and actin regulator 2 [ Mesocricetus auratus (golden hamster) ]

Gene ID: 101840773, updated on 8-Mar-2024

Summary

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Gene symbol
Phactr2
Gene description
phosphatase and actin regulator 2
See related
EnsemblRapid:ENSMAUG00000022240
Gene type
protein coding
RefSeq status
MODEL
Organism
Mesocricetus auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
103 current BCM_Maur_2.0 (GCF_017639785.1) Unplaced Scaffold NW_024429199.1 (31946849..32204894)
102 previous assembly MesAur1.0 (GCF_000349665.1) Unplaced Scaffold NW_004801608.1 (18010604..18268932)

NW_024429199.1Genomic Context describing neighboring genes Neighboring gene peroxisomal biogenesis factor 3 Neighboring gene alpha-L-fucosidase 2 Neighboring gene zinc finger C2HC-type containing 1B Neighboring gene LTV1 ribosome biogenesis factor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly, annotation, and characterization of the whole brain transcriptome of male and female Syrian hamsters. McCann KE, et al. Sci Rep, 2017 Jan 10. PMID 28071753, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatase and actin regulator 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mesocricetus auratus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Maur_2.0 Primary Assembly

Genomic

  1. NW_024429199.1 Reference BCM_Maur_2.0 Primary Assembly

    Range
    31946849..32204894
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040758222.1 → XP_040614156.1  phosphatase and actin regulator 2 isoform X1

    Conserved Domains (1) summary
    smart00707
    Location:597 → 618
    RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2

  2. XM_040758223.1 → XP_040614157.1  phosphatase and actin regulator 2 isoform X2

    Conserved Domains (1) summary
    smart00707
    Location:587 → 611
    RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2

  3. XM_021224459.2 → XP_021080118.1  phosphatase and actin regulator 2 isoform X7

    UniProtKB/TrEMBL
    A0A1U8BQ67, A0A3Q0CHY3
    Related
    ENSMAUP00000034062.1, ENSMAUT00000070341.1
    Conserved Domains (2) summary
    smart00707
    Location:459 → 480
    RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2
    pfam02755
    Location:131 → 153
    RPEL; RPEL repeat

  4. XM_021224452.2 → XP_021080111.1  phosphatase and actin regulator 2 isoform X5

    UniProtKB/TrEMBL
    A0A1U8BQ67, A0A3Q0CH59
    Related
    ENSMAUP00000025854.2, ENSMAUT00000029878.2
    Conserved Domains (2) summary
    smart00707
    Location:512 → 533
    RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2
    pfam02755
    Location:131 → 153
    RPEL; RPEL repeat

  5. XM_021224455.2 → XP_021080114.1  phosphatase and actin regulator 2 isoform X6

    UniProtKB/TrEMBL
    A0A1U8BQ67, A0A3Q0CJF9
    Conserved Domains (2) summary
    smart00707
    Location:502 → 526
    RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2
    pfam02755
    Location:131 → 153
    RPEL; RPEL repeat

  6. XM_040758225.1 → XP_040614159.1  phosphatase and actin regulator 2 isoform X4

    UniProtKB/TrEMBL
    A0A1U8BQ67
    Related
    ENSMAUP00000025855.2, ENSMAUT00000029879.2
    Conserved Domains (1) summary
    smart00707
    Location:527 → 548
    RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2

  7. XM_040758224.1 → XP_040614158.1  phosphatase and actin regulator 2 isoform X3

    UniProtKB/TrEMBL
    A0A1U8BQ67
    Conserved Domains (1) summary
    smart00707
    Location:538 → 559
    RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2
Nucleotide Protein
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