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Mctp1 multiple C2 and transmembrane domain containing 1 [ Mesocricetus auratus (golden hamster) ]

Gene ID: 101838374, updated on 8-Mar-2024

Summary

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Gene symbol
Mctp1
Gene description
multiple C2 and transmembrane domain containing 1
See related
EnsemblRapid:ENSMAUG00000017091
Gene type
protein coding
RefSeq status
MODEL
Organism
Mesocricetus auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
24
Annotation release Status Assembly Chr Location
103 current BCM_Maur_2.0 (GCF_017639785.1) Unplaced Scaffold NW_024429201.1 (40120191..40641520, complement)
102 previous assembly MesAur1.0 (GCF_000349665.1) Unplaced Scaffold NW_004801607.1 (35394617..35752780, complement)

NW_024429201.1Genomic Context describing neighboring genes Neighboring gene KIAA0825 ortholog Neighboring gene SMC5-SMC6 complex localization factor 1 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC121133126 Neighboring gene family with sequence similarity 81 member B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing and development of an expression microarray platform for liver infection in adenovirus type 5-infected Syrian golden hamsters. Ying B, et al. Virology, 2015 Nov. PMID 26319212, Free PMC Article
  2. De novo assembly, annotation, and characterization of the whole brain transcriptome of male and female Syrian hamsters. McCann KE, et al. Sci Rep, 2017 Jan 10. PMID 28071753, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of neurotransmitter secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in synaptic vesicle membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
multiple C2 and transmembrane domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mesocricetus auratus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Maur_2.0 Primary Assembly

Genomic

  1. NW_024429201.1 Reference BCM_Maur_2.0 Primary Assembly

    Range
    40120191..40641520 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040728844.1 → XP_040584778.1  multiple C2 and transmembrane domain-containing protein 1 isoform X4

    Conserved Domains (4) summary
    cd04042
    Location:260 → 381
    C2A_MCTP_PRT; C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP)
    cd08376
    Location:443 → 558
    C2B_MCTP_PRT; C2 domain second repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP)
    cd08377
    Location:598 → 716
    C2C_MCTP_PRT; C2 domain third repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP)
    pfam08372
    Location:859 → 915
    PRT_C; Plant phosphoribosyltransferase C-terminal

  2. XM_040728841.1 → XP_040584775.1  multiple C2 and transmembrane domain-containing protein 1 isoform X1

    Conserved Domains (4) summary
    cd04042
    Location:260 → 381
    C2A_MCTP_PRT; C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP)
    cd08376
    Location:443 → 558
    C2B_MCTP_PRT; C2 domain second repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP)
    cd08377
    Location:598 → 716
    C2C_MCTP_PRT; C2 domain third repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP)
    pfam08372
    Location:859 → 944
    PRT_C; Plant phosphoribosyltransferase C-terminal

  3. XM_040728842.1 → XP_040584776.1  multiple C2 and transmembrane domain-containing protein 1 isoform X2

    Related
    ENSMAUP00000043977.1, ENSMAUT00000071993.1
    Conserved Domains (4) summary
    cd04042
    Location:260 → 381
    C2A_MCTP_PRT; C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP)
    cd08376
    Location:423 → 538
    C2B_MCTP_PRT; C2 domain second repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP)
    cd08377
    Location:578 → 696
    C2C_MCTP_PRT; C2 domain third repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP)
    pfam08372
    Location:839 → 924
    PRT_C; Plant phosphoribosyltransferase C-terminal

  4. XM_040728843.1 → XP_040584777.1  multiple C2 and transmembrane domain-containing protein 1 isoform X3

    Related
    ENSMAUP00000047441.1, ENSMAUT00000046370.1
    Conserved Domains (4) summary
    cd04042
    Location:260 → 381
    C2A_MCTP_PRT; C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP)
    cd08376
    Location:410 → 525
    C2B_MCTP_PRT; C2 domain second repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP)
    cd08377
    Location:565 → 683
    C2C_MCTP_PRT; C2 domain third repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP)
    pfam08372
    Location:826 → 911
    PRT_C; Plant phosphoribosyltransferase C-terminal

  5. XM_040728847.1 → XP_040584781.1  multiple C2 and transmembrane domain-containing protein 1 isoform X7

    UniProtKB/TrEMBL
    A0A3Q0CF52
    Related
    ENSMAUP00000036753.1, ENSMAUT00000058316.1
    Conserved Domains (4) summary
    cd04042
    Location:40 → 161
    C2A_MCTP_PRT; C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP)
    cd08376
    Location:210 → 325
    C2B_MCTP_PRT; C2 domain second repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP)
    cd08377
    Location:365 → 483
    C2C_MCTP_PRT; C2 domain third repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP)
    pfam08372
    Location:626 → 711
    PRT_C; Plant phosphoribosyltransferase C-terminal

  6. XM_040728848.1 → XP_040584782.1  multiple C2 and transmembrane domain-containing protein 1 isoform X8

    UniProtKB/TrEMBL
    A0A3Q0CF52
    Conserved Domains (4) summary
    cd04042
    Location:40 → 161
    C2A_MCTP_PRT; C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP)
    cd08376
    Location:203 → 318
    C2B_MCTP_PRT; C2 domain second repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP)
    cd08377
    Location:358 → 476
    C2C_MCTP_PRT; C2 domain third repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP)
    pfam08372
    Location:619 → 675
    PRT_C; Plant phosphoribosyltransferase C-terminal

  7. XM_040728846.1 → XP_040584780.1  multiple C2 and transmembrane domain-containing protein 1 isoform X6

    UniProtKB/TrEMBL
    A0A3Q0CF52
    Related
    ENSMAUP00000018571.2, ENSMAUT00000022532.2
    Conserved Domains (4) summary
    cd04042
    Location:40 → 161
    C2A_MCTP_PRT; C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP)
    cd08376
    Location:219 → 334
    C2B_MCTP_PRT; C2 domain second repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP)
    cd08377
    Location:374 → 492
    C2C_MCTP_PRT; C2 domain third repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP)
    pfam08372
    Location:635 → 720
    PRT_C; Plant phosphoribosyltransferase C-terminal

  8. XM_040728845.1 → XP_040584779.1  multiple C2 and transmembrane domain-containing protein 1 isoform X5

    UniProtKB/TrEMBL
    A0A3Q0CF52
    Related
    ENSMAUP00000028660.1, ENSMAUT00000037082.1
    Conserved Domains (4) summary
    cd04042
    Location:40 → 161
    C2A_MCTP_PRT; C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP)
    cd08376
    Location:239 → 354
    C2B_MCTP_PRT; C2 domain second repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP)
    cd08377
    Location:394 → 512
    C2C_MCTP_PRT; C2 domain third repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP)
    pfam08372
    Location:655 → 740
    PRT_C; Plant phosphoribosyltransferase C-terminal
Nucleotide Protein Strain
Heading Accession and Version

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