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Tpm4 tropomyosin 4 [ Mesocricetus auratus (golden hamster) ]

Gene ID: 101836260, updated on 8-Mar-2024

Summary

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Gene symbol
Tpm4
Gene description
tropomyosin 4
See related
EnsemblRapid:ENSMAUG00000040546
Gene type
protein coding
RefSeq status
MODEL
Organism
Mesocricetus auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
103 current BCM_Maur_2.0 (GCF_017639785.1) Unplaced Scaffold NW_024429185.1 (3276582..3301508, complement)
102 previous assembly MesAur1.0 (GCF_000349665.1) Unplaced Scaffold NW_004801855.1 (297927..316623)

NW_024429185.1Genomic Context describing neighboring genes Neighboring gene hematopoietic SH2 domain containing Neighboring gene RAB8A, member RAS oncogene family Neighboring gene olfactory receptor 1361-like Neighboring gene olfactory receptor 2Z1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly, annotation, and characterization of the whole brain transcriptome of male and female Syrian hamsters. McCann KE, et al. Sci Rep, 2017 Jan 10. PMID 28071753, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in muscle contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in actin filament IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tropomyosin alpha-4 chain

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mesocricetus auratus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Maur_2.0 Primary Assembly

Genomic

  1. NW_024429185.1 Reference BCM_Maur_2.0 Primary Assembly

    Range
    3276582..3301508 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040742178.1 → XP_040598112.1  tropomyosin alpha-4 chain isoform X1

    Related
    ENSMAUP00000045846.1, ENSMAUT00000063317.1
    Conserved Domains (1) summary
    TIGR02168
    Location:32 → 266
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type

  2. XM_040742179.1 → XP_040598113.1  tropomyosin alpha-4 chain isoform X2

    Related
    ENSMAUP00000036500.1, ENSMAUT00000075038.1
    Conserved Domains (1) summary
    pfam00261
    Location:12 → 246
    Tropomyosin
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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