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Urod uroporphyrinogen decarboxylase [ Mesocricetus auratus (golden hamster) ]

Gene ID: 101835940, updated on 8-Mar-2024

Summary

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Gene symbol
Urod
Gene description
uroporphyrinogen decarboxylase
See related
EnsemblRapid:ENSMAUG00000015786
Gene type
protein coding
RefSeq status
MODEL
Organism
Mesocricetus auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
103 current BCM_Maur_2.0 (GCF_017639785.1) Unplaced Scaffold NW_024429197.1 (24807179..24812180)
102 previous assembly MesAur1.0 (GCF_000349665.1) Unplaced Scaffold NW_004801635.1 (5009807..5014759)

NW_024429197.1Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 2B subunit gamma Neighboring gene U6 spliceosomal RNA Neighboring gene HECT domain E3 ubiquitin protein ligase 3 Neighboring gene zinc finger SWIM-type containing 5 Neighboring gene U11 spliceosomal RNA Neighboring gene translationally-controlled tumor protein-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly, annotation, and characterization of the whole brain transcriptome of male and female Syrian hamsters. McCann KE, et al. Sci Rep, 2017 Jan 10. PMID 28071753, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables uroporphyrinogen decarboxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heme biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uroporphyrinogen decarboxylase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mesocricetus auratus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Maur_2.0 Primary Assembly

Genomic

  1. NW_024429197.1 Reference BCM_Maur_2.0 Primary Assembly

    Range
    24807179..24812180
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005072052.4 → XP_005072109.1  uroporphyrinogen decarboxylase isoform X1

    UniProtKB/TrEMBL
    A0A1U7QEC4
    Related
    ENSMAUP00000016750.2, ENSMAUT00000020689.2
    Conserved Domains (1) summary
    cd00717
    Location:20 → 359
    URO-D; Uroporphyrinogen decarboxylase (URO-D) is a dimeric cytosolic enzyme that decarboxylates the four acetate side chains of uroporphyrinogen III (uro-III) to create coproporphyrinogen III, without requiring any prosthetic groups or cofactors. This reaction ...

  2. XM_040756888.1 → XP_040612822.1  uroporphyrinogen decarboxylase isoform X2

    Related
    ENSMAUP00000026610.1, ENSMAUT00000071007.1
    Conserved Domains (1) summary
    cd00717
    Location:20 → 338
    URO-D; Uroporphyrinogen decarboxylase (URO-D) is a dimeric cytosolic enzyme that decarboxylates the four acetate side chains of uroporphyrinogen III (uro-III) to create coproporphyrinogen III, without requiring any prosthetic groups or cofactors. This reaction ...
Nucleotide Protein
Heading Accession and Version

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