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Accs 1-aminocyclopropane-1-carboxylate synthase homolog (inactive) [ Mesocricetus auratus (golden hamster) ]

Gene ID: 101833368, updated on 8-Mar-2024

Summary

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Gene symbol
Accs
Gene description
1-aminocyclopropane-1-carboxylate synthase homolog (inactive)
See related
EnsemblRapid:ENSMAUG00000007912
Gene type
protein coding
RefSeq status
MODEL
Organism
Mesocricetus auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
103 current BCM_Maur_2.0 (GCF_017639785.1) Unplaced Scaffold NW_024429189.1 (61599835..61615233, complement)
102 previous assembly MesAur1.0 (GCF_000349665.1) Unplaced Scaffold NW_004801605.1 (29876368..29891711)

NW_024429189.1Genomic Context describing neighboring genes Neighboring gene ALX homeobox 4 Neighboring gene exostosin glycosyltransferase 2 Neighboring gene probable inactive 1-aminocyclopropane-1-carboxylate synthase-like protein 2 Neighboring gene uncharacterized LOC110342355

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly, annotation, and characterization of the whole brain transcriptome of male and female Syrian hamsters. McCann KE, et al. Sci Rep, 2017 Jan 10. PMID 28071753, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in amino acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
1-aminocyclopropane-1-carboxylate synthase-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mesocricetus auratus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Maur_2.0 Primary Assembly

Genomic

  1. NW_024429189.1 Reference BCM_Maur_2.0 Primary Assembly

    Range
    61599835..61615233 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013122498.3 → XP_012977952.1  1-aminocyclopropane-1-carboxylate synthase-like protein 1 isoform X1

    See identical proteins and their annotated locations for XP_012977952.1

    UniProtKB/TrEMBL
    A0A1U8CEW1, A0A1U8CQB6
    Conserved Domains (2) summary
    cd00609
    Location:100 → 477
    AAT_like; Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine ...
    PLN02450
    Location:81 → 498
    PLN02450; 1-aminocyclopropane-1-carboxylate synthase

  2. XM_013122506.3 → XP_012977960.1  1-aminocyclopropane-1-carboxylate synthase-like protein 1 isoform X1

    See identical proteins and their annotated locations for XP_012977960.1

    UniProtKB/TrEMBL
    A0A1U8CEW1, A0A1U8CQB6
    Conserved Domains (2) summary
    cd00609
    Location:100 → 477
    AAT_like; Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine ...
    PLN02450
    Location:81 → 498
    PLN02450; 1-aminocyclopropane-1-carboxylate synthase

  3. XM_013122502.3 → XP_012977956.1  1-aminocyclopropane-1-carboxylate synthase-like protein 1 isoform X1

    See identical proteins and their annotated locations for XP_012977956.1

    UniProtKB/TrEMBL
    A0A1U8CEW1, A0A1U8CQB6
    Conserved Domains (2) summary
    cd00609
    Location:100 → 477
    AAT_like; Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine ...
    PLN02450
    Location:81 → 498
    PLN02450; 1-aminocyclopropane-1-carboxylate synthase

  4. XM_013122512.3 → XP_012977966.1  1-aminocyclopropane-1-carboxylate synthase-like protein 1 isoform X1

    See identical proteins and their annotated locations for XP_012977966.1

    UniProtKB/TrEMBL
    A0A1U8CEW1, A0A1U8CQB6
    Related
    ENSMAUP00000005876.2, ENSMAUT00000009643.2
    Conserved Domains (2) summary
    cd00609
    Location:100 → 477
    AAT_like; Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine ...
    PLN02450
    Location:81 → 498
    PLN02450; 1-aminocyclopropane-1-carboxylate synthase

  5. XM_040745903.1 → XP_040601837.1  1-aminocyclopropane-1-carboxylate synthase-like protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A1U8CQB6
    Conserved Domains (1) summary
    PLN02450
    Location:43 → 443
    PLN02450; 1-aminocyclopropane-1-carboxylate synthase
Nucleotide Protein
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