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Apbb3 amyloid beta precursor protein binding family B member 3 [ Mesocricetus auratus (golden hamster) ]

Gene ID: 101832182, updated on 8-Mar-2024

Summary

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Gene symbol
Apbb3
Gene description
amyloid beta precursor protein binding family B member 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Mesocricetus auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
103 current BCM_Maur_2.0 (GCF_017639785.1) Unplaced Scaffold NW_024429184.1 (117862906..117869575)
102 previous assembly MesAur1.0 (GCF_000349665.1) Unplaced Scaffold NW_004801621.1 (22867395..22874079)

NW_024429184.1Genomic Context describing neighboring genes Neighboring gene SLC35A4 upstream open reading frame protein Neighboring gene solute carrier family 35 member A4 Neighboring gene ankyrin repeat and KH domain-containing protein 1 Neighboring gene steroid receptor RNA activator 1 Neighboring gene eukaryotic translation initiation factor 4 gamma 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly, annotation, and characterization of the whole brain transcriptome of male and female Syrian hamsters. McCann KE, et al. Sci Rep, 2017 Jan 10. PMID 28071753, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables amyloid-beta binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription factor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
amyloid-beta A4 precursor protein-binding family B member 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mesocricetus auratus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Maur_2.0 Primary Assembly

Genomic

  1. NW_024429184.1 Reference BCM_Maur_2.0 Primary Assembly

    Range
    117862906..117869575
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013112732.3 → XP_012968186.1  amyloid-beta A4 precursor protein-binding family B member 3 isoform X4

    UniProtKB/TrEMBL
    A0A1U8BLB2
    Conserved Domains (3) summary
    smart00456
    Location:30 → 61
    WW; Domain with 2 conserved Trp (W) residues
    cd01271
    Location:283 → 413
    PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
    cd01272
    Location:116 → 254
    PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain

  2. XM_021226679.2 → XP_021082338.1  amyloid-beta A4 precursor protein-binding family B member 3 isoform X1

    UniProtKB/TrEMBL
    A0A3Q0CP67
    Conserved Domains (3) summary
    smart00456
    Location:30 → 61
    WW; Domain with 2 conserved Trp (W) residues
    cd01271
    Location:278 → 385
    PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
    cd01272
    Location:116 → 254
    PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain

  3. XM_040741955.1 → XP_040597889.1  amyloid-beta A4 precursor protein-binding family B member 3 isoform X3

    Conserved Domains (3) summary
    smart00456
    Location:30 → 61
    WW; Domain with 2 conserved Trp (W) residues
    cd01271
    Location:283 → 408
    PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
    cd01272
    Location:116 → 254
    PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain

  4. XM_013112733.3 → XP_012968187.1  amyloid-beta A4 precursor protein-binding family B member 3 isoform X5

    UniProtKB/TrEMBL
    A0A1U8BLX5
    Conserved Domains (3) summary
    smart00456
    Location:30 → 61
    WW; Domain with 2 conserved Trp (W) residues
    cd01271
    Location:288 → 418
    PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
    cd01272
    Location:116 → 259
    PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain

  5. XM_040741954.1 → XP_040597888.1  amyloid-beta A4 precursor protein-binding family B member 3 isoform X2

    Conserved Domains (2) summary
    cd01271
    Location:251 → 381
    PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
    cd01272
    Location:84 → 222
    PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain
Nucleotide Protein
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