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Cped1 cadherin like and PC-esterase domain containing 1 [ Mesocricetus auratus (golden hamster) ]

Gene ID: 101829995, updated on 8-Mar-2024

Summary

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Gene symbol
Cped1
Gene description
cadherin like and PC-esterase domain containing 1
See related
EnsemblRapid:ENSMAUG00000012676
Gene type
protein coding
RefSeq status
MODEL
Organism
Mesocricetus auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus
Orthologs
human mouse all
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Genomic context

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See Cped1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
103 current BCM_Maur_2.0 (GCF_017639785.1) Unplaced Scaffold NW_024429200.1 (18808005..19066434, complement)
102 previous assembly MesAur1.0 (GCF_000349665.1) Unplaced Scaffold NW_004801683.1 (2992681..3251032)

NW_024429200.1Genomic Context describing neighboring genes Neighboring gene FAM3 metabolism regulating signaling molecule C Neighboring gene Wnt family member 16 Neighboring gene U1 spliceosomal RNA Neighboring gene inhibitor of growth family member 3 Neighboring gene uncharacterized LOC121132987 Neighboring gene tetraspanin 12

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing and development of an expression microarray platform for liver infection in adenovirus type 5-infected Syrian golden hamsters. Ying B, et al. Virology, 2015 Nov. PMID 26319212, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
cadherin-like and PC-esterase domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mesocricetus auratus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Maur_2.0 Primary Assembly

Genomic

  1. NW_024429200.1 Reference BCM_Maur_2.0 Primary Assembly

    Range
    18808005..19066434 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013119074.3 → XP_012974528.1  cadherin-like and PC-esterase domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A1U8CFC4
    Related
    ENSMAUP00000012332.2, ENSMAUT00000016236.2
    Conserved Domains (2) summary
    pfam12733
    Location:575 → 656
    Cadherin-like; Cadherin-like beta sandwich domain
    pfam13839
    Location:745 → 1010
    PC-Esterase; GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p

  2. XM_040728510.1 → XP_040584444.1  cadherin-like and PC-esterase domain-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A3Q0D425
    Conserved Domains (1) summary
    pfam12733
    Location:415 → 499
    Cadherin-like; Cadherin-like beta sandwich domain
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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