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Gnpda1 glucosamine-6-phosphate deaminase 1 [ Mesocricetus auratus (golden hamster) ]

Gene ID: 101825394, updated on 8-Mar-2024

Summary

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Gene symbol
Gnpda1
Gene description
glucosamine-6-phosphate deaminase 1
See related
EnsemblRapid:ENSMAUG00000013980
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mesocricetus auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus
Also known as
GNPI; oscillin
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
103 current BCM_Maur_2.0 (GCF_017639785.1) Unplaced Scaffold NW_024429184.1 (116390174..116408616)
102 previous assembly MesAur1.0 (GCF_000349665.1) Unplaced Scaffold NW_004801621.1 (21370099..21388446)

NW_024429184.1Genomic Context describing neighboring genes Neighboring gene Nedd4 family interacting protein 1 Neighboring gene uncharacterized LOC121139008 Neighboring gene U6 spliceosomal RNA Neighboring gene ring finger protein 14 Neighboring gene protocadherin 12

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Calcium oscillations in mammalian eggs triggered by a soluble sperm protein. Parrington J, et al. Nature, 1996 Jan 25. PMID 8552195
  2. De novo assembly, annotation, and characterization of the whole brain transcriptome of male and female Syrian hamsters. McCann KE, et al. Sci Rep, 2017 Jan 10. PMID 28071753, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucosamine-6-phosphate deaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables identical protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in N-acetylneuraminate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glucosamine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glucosamine-6-phosphate isomerase 1
Names
GNPDA 1
GlcN6P deaminase 1
NP_001268528.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001281599.1 → NP_001268528.1  glucosamine-6-phosphate isomerase 1

    See identical proteins and their annotated locations for NP_001268528.1

    Status: PROVISIONAL

    Source sequence(s)
    X94699
    UniProtKB/Swiss-Prot
    Q64422
    UniProtKB/TrEMBL
    A0A1U7Q2H8
    Related
    ENSMAUP00000014126.2, ENSMAUT00000018041.2
    Conserved Domains (1) summary
    cl00339
    Location:1 → 253
    SugarP_isomerase; SugarP_isomerase: Sugar Phosphate Isomerase family; includes type A ribose 5-phosphate isomerase (RPI_A), glucosamine-6-phosphate (GlcN6P) deaminase, and 6-phosphogluconolactonase (6PGL). RPI catalyzes the reversible conversion of ribose-5-phosphate to ...

RefSeqs of Annotated Genomes: Mesocricetus auratus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Maur_2.0 Primary Assembly

Genomic

  1. NW_024429184.1 Reference BCM_Maur_2.0 Primary Assembly

    Range
    116390174..116408616
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q64422.1 GenPept UniProtKB/Swiss-Prot:Q64422

Gene LinkOut

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