U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Efhc2 EF-hand domain containing 2 [ Mesocricetus auratus (golden hamster) ]

Gene ID: 101825081, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
Efhc2
Gene description
EF-hand domain containing 2
See related
EnsemblRapid:ENSMAUG00000020354
Gene type
protein coding
RefSeq status
MODEL
Organism
Mesocricetus auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
103 current BCM_Maur_2.0 (GCF_017639785.1) Unplaced Scaffold NW_024429213.1 (5023536..5180560)
102 previous assembly MesAur1.0 (GCF_000349665.1) Unplaced Scaffold NW_004801704.1 (1078107..1219935)

NW_024429213.1Genomic Context describing neighboring genes Neighboring gene FUN14 domain containing 1 Neighboring gene pre-mRNA-processing factor 40 homolog A-like Neighboring gene histone H1.0-like Neighboring gene uncharacterized LOC121135215 Neighboring gene uncharacterized LOC121135262

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. De novo assembly, annotation, and characterization of the whole brain transcriptome of male and female Syrian hamsters. McCann KE, et al. Sci Rep, 2017 Jan 10. PMID 28071753, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of neuron projection development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in microtubule IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
EF-hand domain-containing family member C2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Mesocricetus auratus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Maur_2.0 Primary Assembly

Genomic

  1. NW_024429213.1 Reference BCM_Maur_2.0 Primary Assembly

    Range
    5023536..5180560
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040733737.1 → XP_040589671.1  EF-hand domain-containing family member C2 isoform X1

    Related
    ENSMAUP00000036465.1, ENSMAUT00000035271.1
    Conserved Domains (1) summary
    smart00676
    Location:75 → 182
    DM10; Domains in hypothetical proteins in Drosophila, C. elegans and mammals. Occurs singly in some nucleoside diphosphate kinases

  2. XM_021233242.1 → XP_021088901.1  EF-hand domain-containing family member C2 isoform X2

    UniProtKB/TrEMBL
    A0A3Q0D7Z5
    Conserved Domains (2) summary
    smart00676
    Location:61 → 168
    DM10; Domains in hypothetical proteins in Drosophila, C. elegans and mammals. Occurs singly in some nucleoside diphosphate kinases
    pfam06565
    Location:404 → 515
    DUF1126; DUF1126 PH-like domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.