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Bco2 beta-carotene oxygenase 2 [ Mesocricetus auratus (golden hamster) ]

Gene ID: 101824677, updated on 8-Mar-2024

Summary

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Gene symbol
Bco2
Gene description
beta-carotene oxygenase 2
See related
EnsemblRapid:ENSMAUG00000019834
Gene type
protein coding
RefSeq status
MODEL
Organism
Mesocricetus auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
103 current BCM_Maur_2.0 (GCF_017639785.1) Unplaced Scaffold NW_024429203.1 (29179174..29207177, complement)
102 previous assembly MesAur1.0 (GCF_000349665.1) Unplaced Scaffold NW_004801622.1 (13126345..13154411, complement)

NW_024429203.1Genomic Context describing neighboring genes Neighboring gene placenta-expressed transcript 1 protein Neighboring gene 6-pyruvoyltetrahydropterin synthase Neighboring gene testis expressed 12 Neighboring gene interleukin 18 Neighboring gene succinate dehydrogenase complex subunit D

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly, annotation, and characterization of the whole brain transcriptome of male and female Syrian hamsters. McCann KE, et al. Sci Rep, 2017 Jan 10. PMID 28071753, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-carotene 15,15'-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables carotenoid dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carotene catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retinal metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta,beta-carotene 9',10'-oxygenase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mesocricetus auratus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Maur_2.0 Primary Assembly

Genomic

  1. NW_024429203.1 Reference BCM_Maur_2.0 Primary Assembly

    Range
    29179174..29207177 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005069499.4 → XP_005069556.1  beta,beta-carotene 9',10'-oxygenase isoform X1

    UniProtKB/TrEMBL
    A0A1U7QCN3
    Related
    ENSMAUP00000022381.2, ENSMAUT00000026379.2
    Conserved Domains (1) summary
    pfam03055
    Location:19 → 531
    RPE65; Retinal pigment epithelial membrane protein

  2. XM_021226797.2 → XP_021082456.1  beta,beta-carotene 9',10'-oxygenase isoform X2

    UniProtKB/TrEMBL
    A0A3Q0CP54
    Conserved Domains (1) summary
    pfam03055
    Location:16 → 490
    RPE65; Retinal pigment epithelial membrane protein
Nucleotide Protein
Heading Accession and Version

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