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Sh2d6 SH2 domain containing 6 [ Mesocricetus auratus (golden hamster) ]

Gene ID: 101823298, updated on 11-Apr-2024

Summary

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Gene symbol
Sh2d6
Gene description
SH2 domain containing 6
See related
EnsemblRapid:ENSMAUG00000000137
Gene type
protein coding
RefSeq status
MODEL
Organism
Mesocricetus auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
103 current BCM_Maur_2.0 (GCF_017639785.1) Unplaced Scaffold NW_024429266.1 (133735782..133747688, complement)
102 previous assembly MesAur1.0 (GCF_000349665.1) Unplaced Scaffold NW_004801662.1 (12918916..12930107, complement)

NW_024429266.1Genomic Context describing neighboring genes Neighboring gene methionine adenosyltransferase 2A Neighboring gene keratin-associated protein 5-5-like Neighboring gene sperm motility kinase 2B-like Neighboring gene uncharacterized LOC121136741

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly, annotation, and characterization of the whole brain transcriptome of male and female Syrian hamsters. McCann KE, et al. Sci Rep, 2017 Jan 10. PMID 28071753, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell surface receptor protein tyrosine kinase signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
SH2 domain-containing protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mesocricetus auratus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Maur_2.0 Primary Assembly

Genomic

  1. NW_024429266.1 Reference BCM_Maur_2.0 Primary Assembly

    Range
    133735782..133747688 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021230656.2 → XP_021086315.1  SH2 domain-containing protein 6 isoform X1

    UniProtKB/TrEMBL
    A0A3Q0CVB8
    Related
    ENSMAUP00000060024.1, ENSMAUT00000038717.1
    Conserved Domains (2) summary
    cl15255
    Location:269 → 390
    SH2; Src homology 2 (SH2) domain
    cl26464
    Location:44 → 280
    Atrophin-1; Atrophin-1 family

  2. XM_040738483.1 → XP_040594417.1  SH2 domain-containing protein 6 isoform X2

    Conserved Domains (2) summary
    pfam08580
    Location:117 → 256
    KAR9; Yeast cortical protein KAR9
    cl15255
    Location:258 → 379
    SH2; Src homology 2 (SH2) domain

  3. XM_021230657.2 → XP_021086316.1  SH2 domain-containing protein 6 isoform X5

    UniProtKB/TrEMBL
    A0A3Q0D0I9
    Related
    ENSMAUP00000036204.1, ENSMAUT00000044968.1
    Conserved Domains (1) summary
    cl15255
    Location:225 → 346
    SH2; Src homology 2 (SH2) domain

  4. XM_013117763.3 → XP_012973217.1  SH2 domain-containing protein 6 isoform X3

    See identical proteins and their annotated locations for XP_012973217.1

    UniProtKB/TrEMBL
    A0A1U8C177
    Related
    ENSMAUP00000030758.1, ENSMAUT00000074104.1
    Conserved Domains (1) summary
    cl15255
    Location:237 → 358
    SH2; Src homology 2 (SH2) domain

  5. XM_040738484.1 → XP_040594418.1  SH2 domain-containing protein 6 isoform X4

    Conserved Domains (2) summary
    pfam08580
    Location:128 → 267
    KAR9; Yeast cortical protein KAR9
    cl15255
    Location:269 → 352
    SH2; Src homology 2 (SH2) domain
Nucleotide Protein
Heading Accession and Version

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