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NAGA alpha-N-acetylgalactosaminidase [ Ficedula albicollis (Collared flycatcher) ]

Gene ID: 101821644, updated on 8-Mar-2024

Summary

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Gene symbol
NAGA
Gene description
alpha-N-acetylgalactosaminidase
See related
Ensembl:ENSFALG00000011747
Gene type
protein coding
RefSeq status
MODEL
Organism
Ficedula albicollis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Muscicapidae; Ficedula
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1A
Exon count:
8
Annotation release Status Assembly Chr Location
101 current FicAlb1.5 (GCF_000247815.1) 1A NC_021672.1 (49832189..49836835)

Chromosome 1A - NC_021672.1Genomic Context describing neighboring genes Neighboring gene single-pass membrane protein with aspartate rich tail 1 Neighboring gene PH domain containing endocytic trafficking adaptor 2 Neighboring gene WW domain-binding protein 2 Neighboring gene septin 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_021672.1 Chromosome 1A Reference FicAlb1.5 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-galactosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycoside catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycosylceramide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oligosaccharide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-N-acetylgalactosaminidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ficedula albicollis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference FicAlb1.5 Primary Assembly

Genomic

  1. NC_021672.1 Reference FicAlb1.5 Primary Assembly

    Range
    49832189..49836835
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005039666.2 → XP_005039723.1  alpha-N-acetylgalactosaminidase

    UniProtKB/TrEMBL
    U3KB71
    Related
    ENSFALP00000012275.1, ENSFALT00000012325.2
    Conserved Domains (1) summary
    cl07893
    Location:31 → 401
    AmyAc_family; Alpha amylase catalytic domain family
Nucleotide Protein
Heading Accession and Version

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